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scnpilot_expt_750_bf_scaffold_706

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_706_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

626..1234
DNA (609bp) protein (203aa)
SAM-dependent methyltransferase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPV4_9BACT
SAM-dependent methyltransferase {ECO:0000313|EMBL:ELR69407.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis
methyltransferase family protein
scnpilot_expt_750_bf_scaffold_706_2
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1121..2512)
DNA (1392bp) protein (464aa)
Mate efflux family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKF9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH72712.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
multi antimicrobial extrusion protein MatE
scnpilot_expt_750_bf_scaffold_706_3
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2553..4676)
DNA (2124bp) protein (708aa)
TonB-dependent receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA1_CHIPD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIM35242.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_expt_750_bf_scaffold_706_4
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4727..6172)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JPG3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAL63731.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_706_5
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6183..7598)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMF8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69403.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_706_6
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7635..8819)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMF3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69398.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
lipoprotein
scnpilot_expt_750_bf_scaffold_706_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8825..10900)
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003631961 rbh
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:ELR69397.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
TonB-dependent receptor
scnpilot_expt_750_bf_scaffold_706_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10915..11631)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NL48_ELIME
Contig56, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76737.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
ABC transporter, ATP-binding protein
scnpilot_expt_750_bf_scaffold_706_9
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11631..12524)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EZH72705.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
scnpilot_expt_750_bf_scaffold_706_10
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12521..13012)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JKS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR69395.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_706_11
unknown

Not on your lists

comp(13526..13852)
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_706_12
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14553..14888
DNA (336bp) protein (112aa)
Resolvase domain n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5S7_SPHS2
Resolvase domain
Resolvase domain {ECO:0000313|EMBL:ADZ80092.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium s
scnpilot_expt_750_bf_scaffold_706_trna_1
unknown

Not on your lists

comp(14827..14899)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_706_13
unknown

Not on your lists

comp(14898..15035)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_706_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15109..15927
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAR4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91723.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_706_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15943..16164
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94092.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_706_16
unknown

Not on your lists

16677..17270
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_706_17
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17636..18268)
DNA (633bp) protein (211aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTB7_LEAB4
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADQ18655.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Le
scnpilot_expt_750_bf_scaffold_706_18
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18332..20206)
DNA (1875bp) protein (625aa)
Histidine kinase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTB8_LEAB4 rbh
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADQ18656.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byss
scnpilot_expt_750_bf_scaffold_706_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20582..21769)
DNA (1188bp) protein (396aa)
Metallophosphoesterase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKH3_9SPHI rbh
purple acid phosphatase rbh
Purple acid phosphatase {ECO:0000313|EMBL:AHF16913.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_706_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21977..23587)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ50_9SPHI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF16355.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_706_21
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23698..24612)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003673CC1 rbh
Metallophosphoesterase {ECO:0000313|EMBL:KIA92013.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungh
cyclic 3',5'-adenosine monophosphate phosphodiesterase
scnpilot_expt_750_bf_scaffold_706_22
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24686..26491)
DNA (1806bp) protein (602aa)
RagB/SusD domain-containing protein n=3 Tax=Elizabethkingia RepID=H0KRT1_9FLAO
Glycan metabolism protein {ECO:0000313|EMBL:KFF10105.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacteriu
SusD family protein
scnpilot_expt_750_bf_scaffold_706_23
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26600..30091)
DNA (3492bp) protein (1164aa)
Collagen-binding protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NG49_ELIME
TonB-dependent Receptor Plug Domain protein {ECO:0000313|EMBL:AJW64531.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source
TonB-dependent Receptor Plug Domain protein
scnpilot_expt_750_bf_scaffold_706_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30251..31369)
DNA (1119bp) protein (373aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH53_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90746.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
anti-FecI sigma factor FecR
scnpilot_expt_750_bf_scaffold_706_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31449..32012)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CD093
Uncharacterized protein {ECO:0000313|EMBL:KIC90796.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_expt_750_bf_scaffold_706_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(32191..32745)
DNA (555bp) protein (185aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
glycyl-tRNA synthetease n=1 Tax=Segetibacter koreensis RepID=UPI0003661282
Suspect SCG annotation. See neighboring gene [scnpilot_expt_750_bf_scaffold_706_27].
glycyl-tRNA synthetease
scnpilot_expt_750_bf_scaffold_706_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(32850..33605)
DNA (756bp) protein (252aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL38_NIAKG
glycyl-tRNA synthetase
scnpilot_expt_750_bf_scaffold_706_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33684..34964)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F3015
Uncharacterized protein {ECO:0000313|EMBL:GAO41480.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_706_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35082..36452)
DNA (1371bp) protein (457aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW1_NIAKG
NADH dehydrogenase subunit N
Displaying items 1-30 of 52 in total

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