ggKbase home page

scnpilot_expt_750_bf_scaffold_781

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_781_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(502..783)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91895.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_781_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(827..1909)
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE8_NIAKG
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinoph
scnpilot_expt_750_bf_scaffold_781_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2036..3046
DNA (1011bp) protein (337aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphing
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUX5_CHIPD rbh
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha rbh
scnpilot_expt_750_bf_scaffold_781_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3101..3775
DNA (675bp) protein (225aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFF0_NIAKG
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEV98381.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sou
scnpilot_expt_750_bf_scaffold_781_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3816..4316
DNA (501bp) protein (167aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFF1_NIAKG
6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
scnpilot_expt_750_bf_scaffold_781_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4444..4854
DNA (411bp) protein (137aa)
Uncharacterized protein family UPF0310 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFH5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45636.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_781_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5139..7049
DNA (1911bp) protein (637aa)
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AEW00243.1}; EC=3.5.99.6 {ECO:0000313|EMBL:AEW00243.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitin
Glucosamine-6-phosphate deaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q0_NIAKG
glucosamine-6-phosphate deaminase
scnpilot_expt_750_bf_scaffold_781_trna_1
unknown

Not on your lists

7176..7249
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_781_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7539..9014
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7D8_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KIC95900.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_781_9
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9375..10418
DNA (1044bp) protein (348aa)
cbh; Choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase {ECO:0000313|EMBL:AJW62526.1}; EC=3.5.1.24 {ECO:0000313|EMBL:AJW62526.1};; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
Penicillin amidase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHD5_ELIME
scnpilot_expt_750_bf_scaffold_781_10
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10599..11627
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003752659
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGN78258.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
scnpilot_expt_750_bf_scaffold_781_11
unknown

Not on your lists

comp(11857..12207)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_781_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12425..14509
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003683C6C
outer membrane receptor for ferrienterochelin and colicins
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:AFD05604.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphing
scnpilot_expt_750_bf_scaffold_781_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14544..15950
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B75C1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIF31358.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_781_14
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15984..16919
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379D4C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05605.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
scnpilot_expt_750_bf_scaffold_781_15
unknown

Not on your lists

comp(17025..17609)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_781_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17754..18338)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037ED486
Uncharacterized protein {ECO:0000313|EMBL:GAO42589.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_781_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18485..19807)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8F5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99125.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_781_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19832..20752)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B324C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95984.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_expt_750_bf_scaffold_781_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20764..22248)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEV7_CHIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO43928.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_781_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22259..25675)
DNA (3417bp) protein (1139aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A3654 rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW00216.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
TonB-dependent receptor plug
scnpilot_expt_750_bf_scaffold_781_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25977..27044
DNA (1068bp) protein (356aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AEW00785.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AEW00785.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinoph
Fructose-bisphosphate aldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJN8_NIAKG rbh
fructose-bisphosphate aldolase
scnpilot_expt_750_bf_scaffold_781_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27153..29729)
DNA (2577bp) protein (859aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chit
Phosphoenolpyruvate carboxylase, type 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK80_NIAKG
Phosphoenolpyruvate carboxylase, type 1
scnpilot_expt_750_bf_scaffold_781_23
unknown

Not on your lists

29890..30177
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_781_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30209..32653
DNA (2445bp) protein (815aa)
Aspartate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK81_NIAKG
Aspartate kinase {ECO:0000313|EMBL:KIC95661.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solis
aspartate kinase
scnpilot_expt_750_bf_scaffold_781_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32774..33724
DNA (951bp) protein (317aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037409A1 rbh
homoserine kinase
scnpilot_expt_750_bf_scaffold_781_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33897..35195
DNA (1299bp) protein (433aa)
Threonine synthase {ECO:0000313|EMBL:AEV96517.1}; EC=4.2.3.1 {ECO:0000313|EMBL:AEV96517.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Nias
Threonine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK83_NIAKG rbh
threonine synthase
scnpilot_expt_750_bf_scaffold_781_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35537..36103
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJM3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00770.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_781_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36180..36881
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CF4BC rbh
Succinate dehydrogenase {ECO:0000313|EMBL:KIC90018.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
scnpilot_expt_750_bf_scaffold_781_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36961..38409
DNA (1449bp) protein (483aa)
sdhA; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase {ECO:0000313|EMBL:AHF15666.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AHF15666.1};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
succinate dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00035D1EC6
Displaying 30 items

View Taxonomy