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scnpilot_expt_750_bf_scaffold_192_16

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15685..15966

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGX4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 153
  • Evalue 1.10e-34
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 153
  • Evalue 3.10e-35
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACU63525.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinopha similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 93.0
  • Bit_score: 153
  • Evalue 1.50e-34

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 282
ATGCCAAAAAGCAAGAAAAAAGCAGAGCGGAAGAAAGCCACGTTAGGACATTTTGATCATGATGTTTTCCTTTCCAACGTTAGTAAACGAATTAGACAACTAAGGAAAGAAAATGGATTTAACTCCTATGAATTATTTGCATATGACGTTGAAGTTTCAAGAGTAGGAATGTCAAAATATGAATCTGGTAACTTTGATGATATAAGGCTTAGAACCTTATTGAAGATTATTGATGGATTGGAAGTTTCTCCTAAAGAGTTTTTCTCAAAAGGATTTGAATAA
PROTEIN sequence
Length: 94
MPKSKKKAERKKATLGHFDHDVFLSNVSKRIRQLRKENGFNSYELFAYDVEVSRVGMSKYESGNFDDIRLRTLLKIIDGLEVSPKEFFSKGFE*