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scnpilot_expt_750_bf_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_192_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..1000
DNA (999bp) protein (333aa)
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAM2_NIAKG
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEV99202.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Nia
scnpilot_expt_750_bf_scaffold_192_2
unknown

Not on your lists

984..1367
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_3
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1642..1890)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI000289D110
Uncharacterized protein {ECO:0000313|EMBL:GAO27770.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
scnpilot_expt_750_bf_scaffold_192_4
unknown

Not on your lists

2460..2630
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_5
unknown

Not on your lists

2584..2976
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_6
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2984..3511
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038036D5
reverse transcriptase Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
Retron-type reverse transcriptase
scnpilot_expt_750_bf_scaffold_192_7
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3584..3928
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038036D5
reverse transcriptase Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
RNA-directed DNA polymerase
scnpilot_expt_750_bf_scaffold_192_8
unknown

Not on your lists

comp(4149..4577)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4902..5864
DNA (963bp) protein (321aa)
Transcriptional regulator AraC family n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P171_9FIRM
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAO44118.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
DNA-binding domain-containing protein
scnpilot_expt_750_bf_scaffold_192_10
unknown

Not on your lists

6176..6520
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_11
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6577..7908)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HR31_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57937.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
carbohydrate-binding protein SusD
scnpilot_expt_750_bf_scaffold_192_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7957..11493)
DNA (3537bp) protein (1179aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ25091.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacte
TonB-dependent receptor
scnpilot_expt_750_bf_scaffold_192_13
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11656..12819)
DNA (1164bp) protein (388aa)
FecR protein id=3088682 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
FecR protein Tax=GWF2_Bacteroidetes_40_14_curated
anti-FecI sigma factor FecR
scnpilot_expt_750_bf_scaffold_192_14
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

Not on your lists

13058..14821
DNA (1764bp) protein (588aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B53073 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR25603.1}; Flags: Fragment;; TaxID=1618515 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_7.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_192_15
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14999..15574)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Sphingobacterium paucimobilis RepID=UPI0003B78FD8
RNA polymerase sigma-70 factor, expansion family 1
Uncharacterized protein {ECO:0000313|EMBL:ERJ58849.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_expt_750_bf_scaffold_192_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15685..15966
DNA (282bp) protein (94aa)
Helix-turn-helix domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGX4_CHIPD
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACU63525.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinopha
scnpilot_expt_750_bf_scaffold_192_17
unknown

Not on your lists

15973..16362
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_18
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16403..16768)
DNA (366bp) protein (122aa)
Helix-turn-helix protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z1M9_BELBD
Transcriptional regulator {ECO:0000313|EMBL:KKB00353.1}; TaxID=728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Avibacterium.;" source="Avibacterium paragal
Helix-turn-helix protein
scnpilot_expt_750_bf_scaffold_192_19
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..18152
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae BIDMC 40 RepID=V2ZPW8_KLEPN
Uncharacterized protein; TaxID=1328426 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae BIDMC 40.;"
scnpilot_expt_750_bf_scaffold_192_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18368..19612
DNA (1245bp) protein (415aa)
Putative plasmid maintenance system antidote protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAH0_NIAKG rbh
putative plasmid maintenance system antidote protein
Putative plasmid maintenance system antidote protein {ECO:0000313|EMBL:AEV98132.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
scnpilot_expt_750_bf_scaffold_192_21
unknown

Not on your lists

19602..20183
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_22
unknown

Not on your lists

comp(20262..20435)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_23
unknown

Not on your lists

comp(20577..20846)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21221..21511
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGJ6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97419.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_192_25
unknown

Not on your lists

comp(22401..23651)
DNA (1251bp) protein (417aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_26
unknown

Not on your lists

comp(23816..25132)
DNA (1317bp) protein (439aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_27
unknown

Not on your lists

comp(25111..25773)
DNA (663bp) protein (221aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_28
unknown

Not on your lists

comp(26320..26547)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_29
unknown

Not on your lists

comp(26563..26859)
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_192_30
unknown

Not on your lists

comp(26967..27260)
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying items 1-30 of 127 in total

View Taxonomy