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scnpilot_expt_750_bf_scaffold_1832_3

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1449..1853

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraB n=1 Tax=Empedobacter brevis RepID=UPI000360DD20 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 134.0
  • Bit_score: 278
  • Evalue 3.30e-72
Conjugal transfer protein TraB {ECO:0000313|EMBL:KEQ31106.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 134.0
  • Bit_score: 269
  • Evalue 2.10e-69
conjugal transfer protein TraB similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 134.0
  • Bit_score: 258
  • Evalue 9.80e-67

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Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCTTCAGATAACAAAAACAACGATTTTGAAAAGCCCAATGTTGATGAGGAATACCTTATGAACGTCATAAGCGGCGATGAGCCTGTTGCTCCACCGACCATTAACAAAAAGCAGGATGTACCAAAGGAAAACAAGCCCAGGGAAAAAGCCCGTAACAGTTCATCAAAGAAAGCGGACTACGAGGAAACGTTTTTGGTCAATCGTTTTCCATCGGGGCGTAATGGCAAGGTCGTTTACATACGCCCTGAATACCACGAAAGATTGCTCCGCATCGTTCAACTGACAAGGGAAGAAAGAACAACGCTCTACTCTTACATTGACAATATTCTTGAACATCATTTCAGGGAGTACGGGGACGATATTACCGATTATTTCAATGAACATTTTAAACCCATTCTATAA
PROTEIN sequence
Length: 135
MASDNKNNDFEKPNVDEEYLMNVISGDEPVAPPTINKKQDVPKENKPREKARNSSSKKADYEETFLVNRFPSGRNGKVVYIRPEYHERLLRIVQLTREERTTLYSYIDNILEHHFREYGDDITDYFNEHFKPIL*