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scnpilot_expt_750_bf_scaffold_1832

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1832_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..429
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:ADY52133.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedob
scnpilot_expt_750_bf_scaffold_1832_2
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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669..1436
DNA (768bp) protein (256aa)
conjugal transfer protein TraA n=1 Tax=Empedobacter brevis RepID=UPI000368C72F rbh
conjugal transfer protein TraA
Conjugal transfer protein TraA {ECO:0000313|EMBL:AIM37856.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
scnpilot_expt_750_bf_scaffold_1832_3
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1449..1853
DNA (405bp) protein (135aa)
conjugal transfer protein TraB n=1 Tax=Empedobacter brevis RepID=UPI000360DD20
Conjugal transfer protein TraB {ECO:0000313|EMBL:KEQ31106.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacte
conjugal transfer protein TraB
scnpilot_expt_750_bf_scaffold_1832_4
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1853..2158
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037F7E67
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIM37854.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_expt_750_bf_scaffold_1832_5
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2171..2806
DNA (636bp) protein (212aa)
conjugal transfer protein TraD n=1 Tax=Empedobacter brevis RepID=UPI0003770CE5 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDT24837.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
conjugal transfer protein TraD
scnpilot_expt_750_bf_scaffold_1832_6
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2863..4617)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=2 Tax=cellular organisms RepID=D7W2X1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF76109.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_expt_750_bf_scaffold_1832_7
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4620..5825)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000362D278 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK34683.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_expt_750_bf_scaffold_1832_8
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5881..6180)
DNA (300bp) protein (100aa)
XRE family transcriptional regulator n=1 Tax=Empedobacter brevis RepID=UPI00035F5A63
helix-turn-helix domain protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK34684.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chry
scnpilot_expt_750_bf_scaffold_1832_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6385..6690
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S619_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK56940.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source=
scnpilot_expt_750_bf_scaffold_1832_10
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6702..7034
DNA (333bp) protein (111aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00037A1855
conjugal transfer protein TraF
Conjugal transfer protein TraF {ECO:0000313|EMBL:AIM37848.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
scnpilot_expt_750_bf_scaffold_1832_11
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7031..7921
DNA (891bp) protein (297aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00035E0248
conjugal transfer protein TraG
Conjugal transfer protein TraG {ECO:0000313|EMBL:AIM37847.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
Displaying 11 items

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