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scnpilot_expt_750_bf_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_53_1
unknown

Not on your lists

comp(1..636)
DNA (636bp) protein (212aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

786..1277
DNA (492bp) protein (164aa)
Putative membrane protein {ECO:0000313|EMBL:EYF08993.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondr
scnpilot_expt_750_bf_scaffold_53_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1764..4181
DNA (2418bp) protein (806aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTB8_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35789.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_53_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4212..4724)
DNA (513bp) protein (171aa)
cumB; zinc-binding hydrolase (EC:3.5.4.-)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
Putative zinc-binding hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6W0_SORC5
scnpilot_expt_750_bf_scaffold_53_trna_1
unknown

Not on your lists

comp(4748..4821)
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_53_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5651..6550
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRG8_SORCE
Thioredoxin-like protein {ECO:0000313|EMBL:EYF05221.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondro
hypothetical protein
scnpilot_expt_750_bf_scaffold_53_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6622..8034
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G6W6_SORC5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92747.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_expt_750_bf_scaffold_53_7
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8162..9334
DNA (1173bp) protein (391aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32)
Peptidase M20D, amidohydrolase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5P1_ANAVT rbh
Peptidase M20 {ECO:0000313|EMBL:KEF43113.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
scnpilot_expt_750_bf_scaffold_53_8
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9331..10500
DNA (1170bp) protein (390aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=472
Carboxylate-amine ligase Nhal_1372 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0W6_NITHN rbh
glutamate--cysteine ligase
scnpilot_expt_750_bf_scaffold_53_9
unknown

Not on your lists

10604..10873
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10959..12074)
DNA (1116bp) protein (372aa)
Putative thiamine biosynthesis lipoprotein ApbE n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZX7_SORC5 rbh
apbE; thiamine biosynthesis lipoprotein ApbE
Putative thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CAN98801.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium
scnpilot_expt_750_bf_scaffold_53_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12208..13386
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEL4_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41308.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_53_12
unknown

Not on your lists

comp(13421..14035)
DNA (615bp) protein (205aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14111..15514)
DNA (1404bp) protein (468aa)
ptsP; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FZU6_SORC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF02335.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
scnpilot_expt_750_bf_scaffold_53_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15687..16127
DNA (441bp) protein (147aa)
Fis family transcriptional regulator n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5B0E0
Uncharacterized protein {ECO:0000313|EMBL:AKF06170.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_expt_750_bf_scaffold_53_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16263..17132
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8U0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39273.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_53_16
unknown

Not on your lists

17426..17788
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_17
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17792..18784
DNA (993bp) protein (331aa)
Cytochrome C n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UF93_9LEPT
Cytochrome C {ECO:0000313|EMBL:EPG64918.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
cytochrome c-like protein
scnpilot_expt_750_bf_scaffold_53_18
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18774..19352)
DNA (579bp) protein (193aa)
GRAM domain protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z0J5_BELBD
Uncharacterized protein {ECO:0000313|EMBL:CDT29185.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
GRAM domain protein
scnpilot_expt_750_bf_scaffold_53_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19513..20682
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLY7_SORCE rbh
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EYF04219.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Cho
acyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_53_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20765..21394)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBP4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96072.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
scnpilot_expt_750_bf_scaffold_53_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21391..22002)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4W1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39275.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_53_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22454..22744
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBP9_SORC5
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=448385 speci
scnpilot_expt_750_bf_scaffold_53_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22846..24474
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJJ2_SORCE rbh
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1254432 spec
scnpilot_expt_750_bf_scaffold_53_24
unknown

Not on your lists

comp(24701..25297)
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_25
unknown

Not on your lists

25679..26800
DNA (1122bp) protein (374aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_26
unknown

Not on your lists

26830..27039
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_53_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27049..29304
DNA (2256bp) protein (752aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcal
recD; exodeoxyribonuclease V (EC:3.1.11.5)
Putative exodeoxyribonuclease V n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FG52_SORC5 rbh
scnpilot_expt_750_bf_scaffold_53_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29460..30071
DNA (612bp) protein (204aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTY4_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN98577.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
scnpilot_expt_750_bf_scaffold_53_29
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30141..30935
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBI2_SORCE
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:EYF04041.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source=
hypothetical protein
Displaying items 1-30 of 250 in total

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