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scnpilot_expt_750_bf_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_191_1
Acinetobacter oleivorans, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..627)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 298 RepID=N9LMU8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHN67481.1}; TaxID=1148157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter olei
scnpilot_expt_750_bf_scaffold_191_2
unknown

Not on your lists

comp(728..1783)
DNA (1056bp) protein (352aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_191_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1905..3539
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ20_HALO1 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKF09961.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
scnpilot_expt_750_bf_scaffold_191_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3758..5056
DNA (1299bp) protein (433aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIJ2_SORCE rbh
scnpilot_expt_750_bf_scaffold_191_5
unknown

Not on your lists

comp(5129..5701)
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_191_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5810..6526)
DNA (717bp) protein (239aa)
Glycosyl transferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XSM3_SORCE
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGP33588.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cell
scnpilot_expt_750_bf_scaffold_191_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6662..7369
DNA (708bp) protein (236aa)
DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLR1_SORC5 rbh
ArsR family transcriptional regulator Tax=RifOxyA12_full_Proteobacteria_58_15_curated
DNA-binding response regulator
scnpilot_expt_750_bf_scaffold_191_8
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7377..8792
DNA (1416bp) protein (472aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RifOxyA12_full_Proteobacte
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZX6_SORCE rbh
hypothetical protein
scnpilot_expt_750_bf_scaffold_191_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8789..9883
DNA (1095bp) protein (365aa)
Phosphate-binding protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WV29_KYRT2 rbh
Phosphate-binding protein {ECO:0000256|PIRNR:PIRNR002756}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphate ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_191_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

9888..10880
DNA (993bp) protein (331aa)
phosphate ABC transporter inner membrane protein; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Phosphate ABC transporter membrane protein 1, PhoT family id=3269515 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
phosphate ABC transporter permease
scnpilot_expt_750_bf_scaffold_191_11
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10877..11722
DNA (846bp) protein (282aa)
Phosphate transport system permease protein PstA n=1 Tax=uncultured bacterium F25-01 RepID=I3VIG0_9BACT
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66568.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
ABC phosphate transporter, inner membrane subunit
scnpilot_expt_750_bf_scaffold_191_12
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11727..12542
DNA (816bp) protein (272aa)
Phosphate ABC transporter, ATP-binding protein PstB n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF48_SORC5 rbh
phosphate ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
pstB; phosphate ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_191_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12587..13417
DNA (831bp) protein (277aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF46_SORC5
phosphate transport system regulatory protein PhoU Tax=RifOxyA12_full_Proteobacteria_58_15_curated
phoU; phosphate transport system regulatory protein PhoU
scnpilot_expt_750_bf_scaffold_191_14
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13487..14959)
DNA (1473bp) protein (491aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q660_9DELT rbh
scnpilot_expt_750_bf_scaffold_191_15
unknown

Not on your lists

comp(15055..15249)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_191_16
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15393..16508
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFZ4_SORC5
HtrA family serine protease {ECO:0000313|EMBL:EYF06266.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chon
hypothetical protein
scnpilot_expt_750_bf_scaffold_191_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16563..17333
DNA (771bp) protein (257aa)
Protein serine/threonine phosphatase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK68_SORCE rbh
Protein serine/threonine phosphatase PrpC, regulation of stationary phase {ECO:0000313|EMBL:EYF06267.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiinea
protein serine/threonine phosphatase
scnpilot_expt_750_bf_scaffold_191_18
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17587..18729
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:EMF52734.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 2543
scnpilot_expt_750_bf_scaffold_191_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18796..19359
DNA (564bp) protein (188aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQ03_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN96828.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_expt_750_bf_scaffold_191_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19360..20052
DNA (693bp) protein (231aa)
translation initiation factor IF-2, partial n=2 Tax=Sorangium cellulosum RepID=UPI00015FBAB9
tif2; translation initiation factor IF-2
Uncharacterized protein {ECO:0000313|EMBL:AGP38453.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_191_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20049..21233
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFW9_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF06307.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_expt_750_bf_scaffold_191_22
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

21230..22429
DNA (1200bp) protein (400aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
glucosyltransferase-I precursor Tax=RBG_13_Chloroflexi_54_8_curated
glucosyltransferase-I
scnpilot_expt_750_bf_scaffold_191_23
unknown

Not on your lists

22426..23742
DNA (1317bp) protein (439aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_191_24
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23717..25069
DNA (1353bp) protein (451aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X2_CHLAD
chromosome condensation regulator RCC1
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ACL23605.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae;
scnpilot_expt_750_bf_scaffold_191_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25066..26871
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_expt_750_bf_scaffold_191_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26970..28394)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyan
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5T8_SORCE
hypothetical protein
scnpilot_expt_750_bf_scaffold_191_27
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(28391..28792)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034A743A
family 3 adenylate cyclase
Family 3 adenylate cyclase {ECO:0000313|EMBL:AFZ19864.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
scnpilot_expt_750_bf_scaffold_191_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28974..29318)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6N7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41102.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_191_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29315..30133)
DNA (819bp) protein (273aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFY4_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98067.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
scnpilot_expt_750_bf_scaffold_191_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30191..31144)
DNA (954bp) protein (318aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F2K5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF07140.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
Displaying items 1-30 of 152 in total

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