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scnpilot_expt_750_bf_scaffold_203

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_203_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..168
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA92561.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
scnpilot_expt_750_bf_scaffold_203_2
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375..1574
DNA (1200bp) protein (400aa)
major facilitator superfamily MFS_1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53EC rbh
Putative 3-phenylpropionic acid transporter {ECO:0000313|EMBL:CDZ79507.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Le
MFS transporter permease
scnpilot_expt_750_bf_scaffold_203_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1562..2830
DNA (1269bp) protein (423aa)
Arsenical pump membrane protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W404_METEP
Na+/H+ antiporter NhaD and related arsenite permease
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
scnpilot_expt_750_bf_scaffold_203_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2949..4175)
DNA (1227bp) protein (409aa)
Arabinose efflux permease family protein n=2 Tax=Singulisphaera acidiphila RepID=L0DCD9_SINAD rbh
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGA26535.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="S
scnpilot_expt_750_bf_scaffold_203_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4357..5085
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZJU8_9XANT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47074.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchar
scnpilot_expt_750_bf_scaffold_203_6

Not on your lists

5372..6304
DNA (933bp) protein (311aa)
Integrase catalytic region n=2 Tax=Holophaga foetida DSM 6591 RepID=H1NZ76_9BACT rbh
Marine sediment metagenome DNA, contig: S01H1_L06957 {ECO:0000313|EMBL:GAF67275.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transposase
scnpilot_expt_750_bf_scaffold_203_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6301..6684
DNA (384bp) protein (128aa)
Integrase catalytic region n=2 Tax=Holophaga foetida DSM 6591 RepID=H1NZ76_9BACT
hypothetical protein
Mlr9129 protein {ECO:0000313|EMBL:BAB54526.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
scnpilot_expt_750_bf_scaffold_203_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6853..7053)
DNA (201bp) protein (67aa)
Mobile element protein {ECO:0000313|EMBL:AKF10008.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandarac
scnpilot_expt_750_bf_scaffold_203_9
unknown

Not on your lists

comp(7376..7489)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7530..8075)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H5P1_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:KHD76971.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_203_trna_3
unknown

Not on your lists

comp(8135..8219)
DNA (85bp)
transferRNA
scnpilot_expt_750_bf_scaffold_203_11
unknown

Not on your lists

comp(8435..8623)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8989..9528
DNA (540bp) protein (180aa)
Exported OmpA domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHP4_SORC5
exported OmpA domain-containing protein
Exported OmpA domain protein {ECO:0000313|EMBL:CAN98236.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangi
scnpilot_expt_750_bf_scaffold_203_13
unknown

Not on your lists

9541..10008
DNA (468bp) protein (156aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_14
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11093..11557)
DNA (465bp) protein (155aa)
UPI0003CF0352 related cluster n=1 Tax=unknown RepID=UPI0003CF0352
50S ribosomal protein L21 {ECO:0000313|EMBL:ESY81630.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
hypothetical protein
scnpilot_expt_750_bf_scaffold_203_15
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11920..12729)
DNA (810bp) protein (270aa)
Conserved pirin-related protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WBB6_RALSL
Conserved pirin-related protein
Conserved pirin-related protein {ECO:0000313|EMBL:CBJ39110.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sol
scnpilot_expt_750_bf_scaffold_203_16
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(12965..15064)
DNA (2100bp) protein (700aa)
Uncharacterized protein {ECO:0000313|EMBL:AFY90370.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
scnpilot_expt_750_bf_scaffold_203_17
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15221..16213)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LJ77_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY14924.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
scnpilot_expt_750_bf_scaffold_203_18
unknown

Not on your lists

comp(16315..16665)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16662..17219)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTG1_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02027.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_expt_750_bf_scaffold_203_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17229..19790)
DNA (2562bp) protein (854aa)
DEAD/DEAH box helicase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHE2_SORCE rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:AGP32547.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
DEAD/DEAH box helicase
scnpilot_expt_750_bf_scaffold_203_21
unknown

Not on your lists

comp(19799..20146)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20181..20579
DNA (399bp) protein (133aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHQ6_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN98239.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
scnpilot_expt_750_bf_scaffold_203_23
unknown

Not on your lists

20931..21689
DNA (759bp) protein (253aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_24
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21674..22426)
DNA (753bp) protein (251aa)
Transcriptional regulator, TetR family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X5L7_9BURK
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KFE66221.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
transcriptional regulator
scnpilot_expt_750_bf_scaffold_203_25
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22492..24135
DNA (1644bp) protein (548aa)
Beta-ketoacyl synthase family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CML4_MYXFH rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:AKF83316.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
beta-ketoacyl synthase family protein
scnpilot_expt_750_bf_scaffold_203_trna_1
unknown

Not on your lists

24263..24350
DNA (88bp)
transferRNA
scnpilot_expt_750_bf_scaffold_203_26
unknown

Not on your lists

comp(25474..26676)
DNA (1203bp) protein (401aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_203_27
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27284..28426
DNA (1143bp) protein (381aa)
penicillin-binding protein n=1 Tax=Paenibacillus elgii RepID=UPI000248D1F1
Beta-lactamase {ECO:0000313|EMBL:KEQ21930.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
beta-lactamase class C
scnpilot_expt_750_bf_scaffold_203_28
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28890..30083)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCL3_ANASK
Uncharacterized protein {ECO:0000313|EMBL:GAO01725.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
hypothetical protein
Displaying items 1-30 of 198 in total

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