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scnpilot_expt_750_bf_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_320_1
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(419..2101)
DNA (1683bp) protein (561aa)
Putative lipoprotein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DA12_MYXXD rbh
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABF90593.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus
scnpilot_expt_750_bf_scaffold_320_2
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2352..3326)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003712928
DNA ligase-like protein {ECO:0000313|EMBL:ENO13231.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
lig; ATP-dependent DNA ligase
scnpilot_expt_750_bf_scaffold_320_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3501..4631)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTJ2_HALO1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYF05561.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_expt_750_bf_scaffold_320_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4628..5194)
DNA (567bp) protein (189aa)
Transcriptional regulator, TetR family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTJ3_HALO1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY13888.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae
scnpilot_expt_750_bf_scaffold_320_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5351..6961)
DNA (1611bp) protein (537aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSB3_ALLVD rbh
phosphoenolpyruvate carboxykinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_expt_750_bf_scaffold_320_6
unknown

Not on your lists

7142..7378
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_320_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7261..7935)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRD3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33183.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_320_8
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(7947..9170)
DNA (1224bp) protein (408aa)
Uncharacterized protein id=12556909 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein id=12556909 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
scnpilot_expt_750_bf_scaffold_320_9
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9167..10765)
DNA (1599bp) protein (533aa)
Putative uncharacterized protein n=1 Tax=Gordonia effusa NBRC 100432 RepID=H0QX92_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIR98020.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
scnpilot_expt_750_bf_scaffold_320_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10901..11890)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQX5_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF05439.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
scnpilot_expt_750_bf_scaffold_320_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11887..13149)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XP10_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33515.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_320_12
unknown

Not on your lists

comp(13151..13528)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_320_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..15477)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YC18_SORCE rbh
Serine/threonine protein kinase Pkn7 {ECO:0000313|EMBL:EYF05440.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" sou
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_320_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15605..16981
DNA (1377bp) protein (459aa)
Putative efflux protein, MATE family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR59_9GAMM
Putative efflux protein, MATE family {ECO:0000313|EMBL:EIL89700.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
putative efflux protein, MATE family
scnpilot_expt_750_bf_scaffold_320_15
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17039..18325)
DNA (1287bp) protein (429aa)
Beta-lactamase domain protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I279_MYCRH
ComEC family competence protein {ECO:0000313|EMBL:CDO08881.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_320_16
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18322..20169)
DNA (1848bp) protein (616aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I280_MYCRH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDO08882.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
peptidase GluZincin family protein
scnpilot_expt_750_bf_scaffold_320_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20598..21047
DNA (450bp) protein (150aa)
Universal stress protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHR9_ANADF
UspA domain-containing protein
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
scnpilot_expt_750_bf_scaffold_320_18
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21083..22048)
DNA (966bp) protein (322aa)
cell entry protein n=1 Tax=Thioalkalivibrio RepID=UPI00037C8CDB
mammalian cell entry related domain protein; K06192 paraquat-inducible protein B Tax=RifOxyA12_full_Proteobacteria_58_15_curated
Mammalian cell entry related domain protein
scnpilot_expt_750_bf_scaffold_320_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22051..22815)
DNA (765bp) protein (255aa)
ABC transporter related n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0REI3_9DELT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYF07858.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" sou
ABC transporter related
scnpilot_expt_750_bf_scaffold_320_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22812..23885)
DNA (1074bp) protein (358aa)
Conserved hypothetical integral membrane protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C463_DESTA
hypothetical protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_320_21
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24407..24853)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U443_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC42342.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
scnpilot_expt_750_bf_scaffold_320_22
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25026..25985)
DNA (960bp) protein (320aa)
Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB49_9DELT
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KIG19306.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_320_23
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26215..28872)
DNA (2658bp) protein (886aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LMK8_HALO1 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKF11118.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
40-residue YVTN family beta-propeller repeat-containing protein
scnpilot_expt_750_bf_scaffold_320_24
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29306..29554)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:ABC81043.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
scnpilot_expt_750_bf_scaffold_320_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

29698..30744
DNA (1047bp) protein (349aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026L9_SOLUE rbh
short chain dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
short chain dehydrogenase
scnpilot_expt_750_bf_scaffold_320_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30741..32531
DNA (1791bp) protein (597aa)
Glycosyl hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FD25_SORC5 rbh
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:CAN91720.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulo
scnpilot_expt_750_bf_scaffold_320_27
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32728..33402
DNA (675bp) protein (225aa)
Putative cytochrome c n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZG0_MYXXD
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:ABF86508.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcu
scnpilot_expt_750_bf_scaffold_320_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33408..36323
DNA (2916bp) protein (972aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4P6_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37893.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_expt_750_bf_scaffold_320_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36320..37729
DNA (1410bp) protein (470aa)
Fe-S-cluster-containing hydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJ73_SORCE rbh
hypothetical protein
Fe-S-cluster-containing hydrogenase {ECO:0000313|EMBL:AGP32574.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source=
scnpilot_expt_750_bf_scaffold_320_30
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37722..38276
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CG50_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI67402.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
Displaying items 1-30 of 71 in total

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