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scnpilot_expt_750_bf_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 613 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_6_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126..632
DNA (507bp) protein (169aa)
Pentapeptide repeat-containing protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JL04_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL29521.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
pentapeptide repeat-containing protein
scnpilot_expt_750_bf_scaffold_6_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..2914
DNA (2136bp) protein (712aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1K1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07564.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
mechanosensitive ion channel protein MscS
scnpilot_expt_750_bf_scaffold_6_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3086..4300
DNA (1215bp) protein (405aa)
Membrane-bound lytic murein transglycosylase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCL8_PELHB rbh
Lytic transglycosylase {ECO:0000313|EMBL:KFL29522.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
membrane-bound lytic murein transglycosylase B
scnpilot_expt_750_bf_scaffold_6_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4473..5471
DNA (999bp) protein (333aa)
Esterase/lipase/thioesterase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RED0_PELHB rbh
Esterase/lipase/thioesterase family protein {ECO:0000313|EMBL:KFC62001.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
esterase
scnpilot_expt_750_bf_scaffold_6_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5563..6177
DNA (615bp) protein (205aa)
UPI0003CF1B45 related cluster n=1 Tax=unknown RepID=UPI0003CF1B45
Uncharacterized protein {ECO:0000313|EMBL:KFC62002.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..6609)
DNA (414bp) protein (138aa)
Putative lactoylglutathione lyase n=1 Tax=Polaromonas sp. CF318 RepID=J2LNC0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KKB07562.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6687..7172)
DNA (486bp) protein (162aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;
Bacterioferritin n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X528_OCHA4
bacterioferritin
scnpilot_expt_750_bf_scaffold_6_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7138..7449)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REC2_PELHB
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KKB07560.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..8898
DNA (1329bp) protein (443aa)
hypothetical protein n=3 Tax=Vibrio splendidus RepID=UPI0002E04050
Uncharacterized protein {ECO:0000313|EMBL:CDP51957.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8952..9656)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07559.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9791..10828)
DNA (1038bp) protein (346aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTV9_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:KKB76947.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
oxidoreductase, aldo/keto reductase family
scnpilot_expt_750_bf_scaffold_6_trna_1
unknown

Not on your lists

11082..11155
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_6_12
Pseudomonas sp. WCS358, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11379..11936)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM84 RepID=J3IVU2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KEY88661.1}; TaxID=1495066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. W
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_13
unknown

Not on your lists

comp(11974..12150)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_6_14
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12114..14183)
DNA (2070bp) protein (690aa)
neutral endopeptidase (EC:3.4.24.-)
Peptidase M13 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FC17_9RHIZ rbh
Peptidase M13 {ECO:0000313|EMBL:EHS49620.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
scnpilot_expt_750_bf_scaffold_6_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14424..15419
DNA (996bp) protein (332aa)
SH3 type 3 domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S418_9RHOB
SH3 type 3 domain protein {ECO:0000313|EMBL:EEW24280.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" sourc
putative hypothetical Gifsy-1 prophage protein
scnpilot_expt_750_bf_scaffold_6_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15753..16451)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ensifer adhaerens RepID=I0FX81_ENSAD
Uncharacterized protein {ECO:0000313|EMBL:KFL28452.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_17
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..17594
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP8_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03993.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winograds
scnpilot_expt_750_bf_scaffold_6_18
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17591..18862
DNA (1272bp) protein (424aa)
Relaxase/mobilization nuclease n=1 Tax=Rhizobium sp. CF142 RepID=J2AV47_9RHIZ rbh
Relaxase/mobilization nuclease {ECO:0000313|EMBL:EJJ27300.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_19
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18878..19384
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z8U1_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB83243.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sou
scnpilot_expt_750_bf_scaffold_6_20
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19384..19611
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L1B9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27302.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_21
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19608..20981
DNA (1374bp) protein (458aa)
Type IV secretory pathway VirD4 component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP5_NITWN rbh
type IV secretory pathway VirD4 components
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:ABA03996.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nit
scnpilot_expt_750_bf_scaffold_6_22
unknown

Not on your lists

21505..21690
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_6_23
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21821..23737
DNA (1917bp) protein (639aa)
Cadmium-translocating P-type ATPase n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KNR4_MICAA rbh
cadmium-translocating P-type ATPase
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:AEP10309.1}; TaxID=856793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13)
scnpilot_expt_750_bf_scaffold_6_24
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24722..25654)
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Shewanella baltica RepID=E6SXG3_SHEB6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX50507.1}; TaxID=399599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (s
scnpilot_expt_750_bf_scaffold_6_25
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26105..28132
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000288DC5E rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC52555.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_expt_750_bf_scaffold_6_26

Not on your lists

28223..28840
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003691F98
Putative mannitol operon repressor {ECO:0000313|EMBL:EKD28375.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
probable mannitol operon repressor
scnpilot_expt_750_bf_scaffold_6_27
unknown

Not on your lists

comp(29245..29982)
DNA (738bp) protein (246aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_6_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30246..30563
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L1C8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ27312.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
scnpilot_expt_750_bf_scaffold_6_29
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30560..32137
DNA (1578bp) protein (526aa)
Resolvase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUN8_NITWN rbh
resolvase
Resolvase {ECO:0000313|EMBL:ABA04003.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb
Displaying items 1-30 of 613 in total

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