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scnpilot_expt_750_bf_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 880 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_10_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..600)
DNA (600bp) protein (200aa)
60 kDa chaperonin n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3V4_9BRAD
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1035 species
groEL; chaperonin GroEL
scnpilot_expt_750_bf_scaffold_10_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(641..955)
DNA (315bp) protein (105aa)
10 kDa chaperonin n=2 Tax=Bradyrhizobiaceae RepID=F7QPC3_9BRAD
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1429916 spec
groES; co-chaperonin GroES
scnpilot_expt_750_bf_scaffold_10_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1385..1669
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WX57_9BRAD
Protein usg {ECO:0000313|EMBL:KIZ45035.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_10_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1829..2458
DNA (630bp) protein (210aa)
cupin n=1 Tax=Afipia birgiae RepID=UPI0002FA928B
Uncharacterized protein {ECO:0000313|EMBL:AHY49565.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
cupin
scnpilot_expt_750_bf_scaffold_10_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2863..4056
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IV36_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD07924.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_expt_750_bf_scaffold_10_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4278..5033)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QER4_RHOPT rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACF00980.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseu
scnpilot_expt_750_bf_scaffold_10_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5162..5908)
DNA (747bp) protein (249aa)
peptidase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366CA69 rbh
putative proteasome-type protease
Proteasome-type protease {ECO:0000313|EMBL:ERF86013.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
scnpilot_expt_750_bf_scaffold_10_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5985..6812)
DNA (828bp) protein (276aa)
Transglutaminase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138L6_RHOPS
transglutaminase-like protein
Transglutaminase-like {ECO:0000313|EMBL:ABE39473.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
scnpilot_expt_750_bf_scaffold_10_9
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6850..7791)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y9I1_9BRAD rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHR04264.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
scnpilot_expt_750_bf_scaffold_10_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..9250)
DNA (1425bp) protein (475aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212I7_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD88699.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_expt_750_bf_scaffold_10_11
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9464..10201
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RV36_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD85813.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_10_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10229..10651
DNA (423bp) protein (141aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138L2_RHOPS
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:ABE39477.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" so
scnpilot_expt_750_bf_scaffold_10_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10660..11187
DNA (528bp) protein (176aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010603}; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010679};; Xanthine-guanine pho
xanthine-guanine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAL7_9BRAD
scnpilot_expt_750_bf_scaffold_10_14
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11361..11990
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SLA2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD94979.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_10_15
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12129..13151)
DNA (1023bp) protein (341aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002F964EB
metE; 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:BAL75854.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
scnpilot_expt_750_bf_scaffold_10_16
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13309..13998
DNA (690bp) protein (230aa)
Glutathione S-transferase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G518_9BRAD rbh
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:BAL75855.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
scnpilot_expt_750_bf_scaffold_10_17
unknown

Not on your lists

13952..14170
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_10_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14181..14792
DNA (612bp) protein (204aa)
Molybdate transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H830_9BRAD rbh
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:KJC62355.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
DSBA oxidoreductase
scnpilot_expt_750_bf_scaffold_10_19
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14792..15769
DNA (978bp) protein (326aa)
quinone oxidoreductase (EC:1.6.5.5)
Enolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HNJ2_9BRAD rbh
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KJC62354.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobi
scnpilot_expt_750_bf_scaffold_10_20
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15972..16862)
DNA (891bp) protein (297aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037A1B17 rbh
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:KGJ71186.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
scnpilot_expt_750_bf_scaffold_10_21
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17030..18424)
DNA (1395bp) protein (465aa)
amidase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003709707 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43463.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
amidase
scnpilot_expt_750_bf_scaffold_10_22
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18421..19587)
DNA (1167bp) protein (389aa)
Putative Amidohydrolase family protein hippurate hydrolase (Benzoylglycine amidohydrolase) {ECO:0000313|EMBL:CCE11036.1}; EC=3.5.1.- {ECO:0000313|EMBL:CCE11036.1};; TaxID=551947 species="Bacteria; Pro
amidohydrolase (EC:3.5.1.32)
Putative Amidohydrolase family protein hippurate hydrolase (Benzoylglycine amidohydrolase) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TX48_9BRAD rbh
scnpilot_expt_750_bf_scaffold_10_23
unknown

Not on your lists

19875..20159
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_10_trna_16
unknown

Not on your lists

comp(20190..20275)
DNA (86bp)
transferRNA
scnpilot_expt_750_bf_scaffold_10_24
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20349..21851)
DNA (1503bp) protein (501aa)
MlrC domain-containing protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DAF26E rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brady
MlrC-like protein
scnpilot_expt_750_bf_scaffold_10_25
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22010..23680)
DNA (1671bp) protein (557aa)
ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI000375B34E rbh
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC38106.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sour
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_10_26
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23677..24570)
DNA (894bp) protein (298aa)
peptide ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C636A rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KJC38003.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
putative ABC transporter permease protein
scnpilot_expt_750_bf_scaffold_10_27
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24570..25511)
DNA (942bp) protein (314aa)
peptide ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036FBC51 rbh
Peptide ABC transporter {ECO:0000313|EMBL:KJC62349.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
ABC transporter inner membrane protein
scnpilot_expt_750_bf_scaffold_10_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25637..26818)
DNA (1182bp) protein (394aa)
Glutamate carboxypeptidase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IT06_9BRAD rbh
Glutamate carboxypeptidase {ECO:0000313|EMBL:ERF85989.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
carboxypeptidase
scnpilot_expt_750_bf_scaffold_10_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27046..28671
DNA (1626bp) protein (542aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131J8_RHOPS rbh
extracellular solute-binding protein
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABE41241.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rh
Displaying items 1-30 of 880 in total

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