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scnpilot_expt_750_bf_scaffold_1031_11

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_62_32

near complete RP 51 / 55 MC: 6 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 6960..10985

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 999.99
  • Bit_score: 2107
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=160 Tax=Bradyrhizobium RepID=G7D4Y7_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 999.99
  • Bit_score: 2103
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 999.99
  • Bit_score: 2103
  • Evalue 0.0

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4026
ATGGCGCAGCAGACGTTCACCGGTCGCAAGAGAGTTCGCAAGTTCTTCGGACATATCCGTGAAGTGGCGCAAATGCCCAACCTGATCGAGGTGCAGAAAGCCTCCTACGATCAGTTCCTGATGGTCGATGAACCCGAAGGCGGCCGCCTCGACGAGGGATTGCAGGCGGTGTTCCGCTCGGTGTTCCCGATCTCGGATTTCTCCAACACCTCGATGCTGGAGTTCGTCCGCTATGAATTCGAGCCGCCGAAGTACGACGTCGACGAGTGCCGCCAGCGCGGCATGACCTTCGCTGCGCCGCTGAAGGTGACGCTGCGCCTCATCGTGTTCGATATCGACGAGGAAACCGGCGCGCGTTCGGTCAAGGACATCAAGGAGCAGGATGTCTACATGGGCGACATTCCGCTCATGACCATGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTTTCGCAGATGCATCGTTCGCCGGGCGTGTTCTTCGATCACGACAAGGGCAAGACGCATTCGTCGGGCAAGCTGCTGTTTGCCGCGCGCGTGATTCCGTATCGTGGCTCGTGGCTCGACATCGAGTTCGATGCCAAGGACATCGTGTTCGCGCGTATCGACCGCCGCCGCAAGATTCCGGTGACGTCGCTGATGTTCGCCCTCGGTCTCGATGGCGAAGAGATCCTGTCGACCTTCTACAAGAAGATCCTCTACAAGCGCACCAAGGACGGCTGGCGCGTGCCGTTCGATGCCTCGCGCTTCCGCGGCTATTCGACGATCAACGACCTGATCGACGCCGACACCGGCAAGGTGGTGCTCGAAGCCGGCAAGAAGCTGACCGTGCGCGGCGCCCGCCAGTTGCAGGAAAAGGGCCTGAAGGCTCTGCGGCTGTCGGACGAAGAGTTGATCGGCAACTATCTTGCCGAAGACCTCGTCAATCCGAAGACCGGTGAGATCCACGCCGAAGCCGGCGAAGAGATCACCGAGAAGTCGTTGAAGGCGTTGAACGAGCAGGGCTACAAGGAATTGCCGCTGCTCGACATCGACCACGTCAACGTCGGTCCCTACATCCGCAACACGCTGAACGCCGACAAGAACATGACGCGTGAAGACGCGCTGTTCGACATCTATCGCGTGATGCGTCCGGGCGAGCCGCCGACGCTGGAATCGGCACAGAACATGTTCCAGTCGCTGTTCTTCGACAGCGAGCGCTACGACCTGTCCGCGGTCGGTCGCGTCAAGATGAACATGCGCCTCGACCTCGATGCGCCGGATACCCATCGCACGCTGCGCAAGGAAGACATCCTCGCGGTCATCAAGACGCTGGTGGACCTGCGCGACGGCAAGGGCGAGATCGACGACATCGACCATCTCGGCAATCGCCGCGTGCGTTCGGTCGGCGAACTGATGGAAAATCAGTATCGCATCGGCCTGCTGCGCATGGAGCGCGCCATCAAGGAGCGCATGTCCTCGGTCGATATCGACACCGTGATGCCGCAGGACCTGATCAACGCCAAGCCGGCGGCGGCAGCCGTGCGCGAGTTCTTCGGCTCGTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAGATCACCCACAAGCGCCGTCTCTCGGCGCTTGGCCCGGGCGGTCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTGCATCCGACGCACTACGGCCGTATCTGCCCGATCGAAACGCCGGAAGGTCCGAACATCGGTCTCATCAACTCGCTGGCGACGTTCGCGCGCGTCAACAAGTACGGCTTCGTCGAGACGCCGTATCGCCGCGTCAAGGACGGCCGCGTCACCGACGACGTGGTGTATCTCTCCGCGATGGAAGAGGGCCGCTACTACGTCGCGCAGGCCAACCTGCCGCTCGACTCCAAGGGCCGCTTCACGGAAGACCTCGTGGTGTGCCGTCACGCCGGCGAAGTGCTGCCGGTGACGCCGGACAAGGTCGACTTCATGGACGTGTCGCCGAAGCAGCTGGTTTCGGTCGCCGCGGCGCTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGTTCGAACATGCAACGTCAGGCCGTGCCGCTGGTGCGGGCTGAAGCGCCGTTCGTCGGCACCGGCATGGAAGGCGTCGTGGCGCGTGACTCCGGTGCGGCGATTGCCGCGCGGCGTTCGGGCGTCATCGACCAGATCGACGCGACTCGTGTGGTTATCCGCGCGACCGAGGATCTCGATCCGACCAAGTCGGGCGTCGATATCTATCGGCTGATGAAGTACCAGCGCTCGAACCAGTCGACCTGCATCAACCAGCGTCCGCTGGTGAAGGTTGGCGACGTGGTCAAGAAGGGCGACATCATCGCTGACGGTCCGTCGACCGATCTCGGCGAGCTCGCGCTCGGCCGTAACGTGCTGGTCGCGTTCATGCCGTGGAATGGCTACAACTTCGAAGACTCGATCCTGCTGTCGGAGCGGATCGTCAAGGACGACGTCTTCACCTCGATCCACATCGAGGAATTCGAAGTCATGGCCCGCGACACCAAGCTCGGCCCCGAGGAAATCACCCGCGATATTCCGAACGTCTCGGAAGAAGCGCTGAAGAACCTCGACGAAGCCGGTATCGTCTACATCGGTGCGGAAGTTCGCGCCGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAAGAAAAGCTGCTGCGCGCCATCTTCGGCGAAAAGGCCTCCGACGTTCGCGACACCTCGCTGCGGGTGCCGCCGGGCGTGCAGGGCACCATCGTCGAAGTCCGCGTGTTCAACCGTCACGGCGTCGACAAGGACGAGCGTGCGCTGGCGATCGAGCGGGAAGAGATCGAACGCCTCGCCAAGGACCGCGACGACGAGCAGGCCATTCTCGACCGTAACGTCTACGGCCGTCTCGCCGACCTTCTGGAAAACCGCCAGGGCATCGCCGGTCCGAAGGGCTTCAAGAAGGACACCAAGATCACCCGCACGGTGCTCGACGAGTATCCGAAGTCGCAGTGGTGGTTGTTCGCGTCGCCGAACGACAAGCTGATGGCCGAAATCGAAGCGATGCGGAAGCAGTACGACGAATCGAAGAAGGGCCTTGAACAGCGCTTCCTCGACAAGGTCGAAAAGCTGCAGCGCGGCGACGAATTGCCTCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGCCGTCGCGCATGAACGTCGGTCAGATTCTCGAAACGCATCTCGGCTGGGCGTGCGCCGGTCTCGGCAAGCGCATCGGCCAGACCGTCGACGCGTATCTGTCGAAGCAGGACGTCAAGCCGCTGAAGGAGACCTTGAAGAAGGTCTACGGCGACAACGAGACCATCAAGTCGCTGAGCGACAACGAACTGGTCGAACTCGGCGGCAACCTCCGCCACGGCGTGCCGATTGCGACGCCGGTGTTCGACGGCGCCAAGGAAGCCGACATCGAAGAGATGCTCGAGCTTGCCGGCGTCGACAAGTCGGGCCAGTCGGTGGTGTACGACGGACGTACCGGCGATCAGTTCGATCGCAAGGTGACGGTGGGCTACATCTACATGCTCAAGCTGCATCACCTTGTCGACGACAAGATCCATGCGCGTTCGATCGGTCCGTACTCGCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGTTTCGGCGAAATGGAGGTGTGGGCGCTCGAGGCTTATGGCGCGGCGTACACCCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTCGCGGGCCGTACCAAGGTCTACGAGGCGATCGTGCGCGGCGACGACACCTTCGAGGCCGGTATTCCGGAATCGTTCAACGTGCTGGTCAAGGAAATGCGCTCGCTCGGCCTCAACGTCGATCTGCACAATTCCAAGCTCGGCACGCCGCCACCGGCGGAGGCCGCTGA
PROTEIN sequence
Length: 1342
MAQQTFTGRKRVRKFFGHIREVAQMPNLIEVQKASYDQFLMVDEPEGGRLDEGLQAVFRSVFPISDFSNTSMLEFVRYEFEPPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGARSVKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMFALGLDGEEILSTFYKKILYKRTKDGWRVPFDASRFRGYSTINDLIDADTGKVVLEAGKKLTVRGARQLQEKGLKALRLSDEELIGNYLAEDLVNPKTGEIHAEAGEEITEKSLKALNEQGYKELPLLDIDHVNVGPYIRNTLNADKNMTREDALFDIYRVMRPGEPPTLESAQNMFQSLFFDSERYDLSAVGRVKMNMRLDLDAPDTHRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPYRRVKDGRVTDDVVYLSAMEEGRYYVAQANLPLDSKGRFTEDLVVCRHAGEVLPVTPDKVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVKVGDVVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREEIERLAKDRDDEQAILDRNVYGRLADLLENRQGIAGPKGFKKDTKITRTVLDEYPKSQWWLFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKAVAHERRSDSRNASRLGVRRSRQAHRPDRRRVSVEAGRQAAEGDLEEGLRRQRDHQVAERQRTGRTRRQPPPRRADCDAGVRRRQGSRHRRDARACRRRQVGPVGGVRRTYRRSVRSQGDGGLHLHAQAASPCRRQDPCAFDRSVLAGHPAAAGRQGAVRRPAFRRNGGVGARGLWRGVHPAGNADGEVGRRRGPYQGLRGDRARRRHLRGRYSGIVQRAGQGNALARPQRRSAQFQARHAATGGGR*