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scnpilot_expt_750_bf_scaffold_2184

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2184_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..979)
DNA (978bp) protein (326aa)
shc; squalene--hopene cyclase Shc (EC:5.4.99.17)
Squalene-hopene cyclase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V590_9BRAD
Squalene--hopene cyclase {ECO:0000313|EMBL:CEG08549.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
scnpilot_expt_750_bf_scaffold_2184_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1003..1629)
DNA (627bp) protein (209aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUA5_9BRAD
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EKS41948.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
hpnE; squalene-associated FAD-dependent desaturase
scnpilot_expt_750_bf_scaffold_2184_3
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1647..2189)
DNA (543bp) protein (181aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YL71_9BRAD
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EHR02164.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brad
hypothetical protein
scnpilot_expt_750_bf_scaffold_2184_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2189..3016)
DNA (828bp) protein (276aa)
Squalene synthase HpnD n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PM97_9BRAD
Squalene synthase HpnD {ECO:0000313|EMBL:EKS42711.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
putative squalene/phytoene synthase
scnpilot_expt_750_bf_scaffold_2184_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3023..3901)
DNA (879bp) protein (293aa)
hpnC; squalene synthase (EC:2.4.1.21)
Putative squalene/phytoene synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JG73_OLICO rbh
Putative squalene/phytoene synthase {ECO:0000313|EMBL:AEI06110.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotrop
scnpilot_expt_750_bf_scaffold_2184_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4220..5806)
DNA (1587bp) protein (529aa)
Radical SAM domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V586_9BRAD rbh
B12-binding domain/radical SAM domain protein, family {ECO:0000313|EMBL:CEG08553.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
methylthiotransferase
scnpilot_expt_750_bf_scaffold_2184_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6065..6985
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8U2_9BRAD rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI50580.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
lysR; transcriptional regulator
scnpilot_expt_750_bf_scaffold_2184_8
unknown

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7201..7302
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2184_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7315..8136
DNA (822bp) protein (274aa)
Protein FdhD homolog n=1 Tax=Afipia sp. 1NLS2 RepID=D6V585_9BRAD rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
fdhD; formate dehydrogenase accessory protein
Displaying 9 items

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