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scnpilot_expt_750_bf_scaffold_1208

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1208_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..342
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D6E0ED
Uncharacterized protein {ECO:0000313|EMBL:EKS41979.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355..993)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI82_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28751.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(990..1541)
DNA (552bp) protein (184aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH46_9BRAD
sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC53593.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
scnpilot_expt_750_bf_scaffold_1208_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1756..2436
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRE1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28753.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_5
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2516..3295
DNA (780bp) protein (260aa)
Enoyl CoA hydratase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2W9_BRAJP
Enoyl-CoA hydratase {ECO:0000313|EMBL:AHY52042.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonic
enoyl CoA hydratase
scnpilot_expt_750_bf_scaffold_1208_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3292..4710)
DNA (1419bp) protein (473aa)
acetyl-CoA hydrolase n=1 Tax=Afipia birgiae RepID=UPI000365AC15
Uncharacterized protein {ECO:0000313|EMBL:EKS41974.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4725..5072)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PME7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41974.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6623
DNA (846bp) protein (282aa)
TolC family type I secretion outer membrane protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUC9_9BRAD
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EKS41973.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
type I secretion outer membrane protein, TolC
scnpilot_expt_750_bf_scaffold_1208_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6639..9764)
DNA (3126bp) protein (1042aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL59_9BRAD rbh
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EGP07712.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae b
cation/heavy metal efflux system protein
scnpilot_expt_750_bf_scaffold_1208_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9798..11069)
DNA (1272bp) protein (424aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK73_9BRAD
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS41971.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
RND family efflux transporter MFP subunit
scnpilot_expt_750_bf_scaffold_1208_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11206..14532)
DNA (3327bp) protein (1109aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
error-prone DNA polymerase (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PMD2_9BRAD
scnpilot_expt_750_bf_scaffold_1208_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14529..16040)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PT81_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42735.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_13
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16012..16809)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I240_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ31865.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17475..18344
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWM7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42733.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
radical SAM family protein
scnpilot_expt_750_bf_scaffold_1208_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18491..19810
DNA (1320bp) protein (440aa)
Uracil-DNA glycosylase family domain-containing protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PJE3_9BRAD
Uracil-DNA glycosylase family domain-containing protein {ECO:0000313|EMBL:EKS42732.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
phage SPO1 DNA polymerase-like protein
scnpilot_expt_750_bf_scaffold_1208_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20067..20711)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PMD9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41964.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20790..21965)
DNA (1176bp) protein (392aa)
amidohydrolase n=1 Tax=Afipia birgiae RepID=UPI0002F0F24C
Amidohydrolase {ECO:0000313|EMBL:EKS41963.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hippuricase rbh
scnpilot_expt_750_bf_scaffold_1208_18
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22016..23638
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PWL0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42728.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
glucose-methanol-choline oxidoreductase
scnpilot_expt_750_bf_scaffold_1208_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23833..24069
DNA (237bp) protein (79aa)
Cysteine rich repeat protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A0_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEG08539.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
scnpilot_expt_750_bf_scaffold_1208_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24148..25539)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI91_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28761.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
class III aminotransferase
scnpilot_expt_750_bf_scaffold_1208_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25665..26303
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQY8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41955.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1208_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26271..26546)
DNA (276bp) protein (92aa)
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V596_9BRAD
Hopanoid biosynthesis associated RND transporter like protein HpnN {ECO:0000313|EMBL:CEG08543.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
hypothetical protein
Displaying 22 items

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