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scnpilot_expt_750_bf_scaffold_1317

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1317_1
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..982
DNA (981bp) protein (327aa)
Putative lysophospholipase L2, (Lecithinase B) {ECO:0000313|EMBL:CCD84768.1}; EC=3.1.1.5 {ECO:0000313|EMBL:CCD84768.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
Putative lysophospholipase L2, (Lecithinase B) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RS41_9BRAD rbh
putative lysophospholipase L2
scnpilot_expt_750_bf_scaffold_1317_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(975..1577)
DNA (603bp) protein (201aa)
DUF81 n=3 Tax=Oligotropha carboxidovorans RepID=B6JB08_OLICO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07695.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1317_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1718..2614
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3F5_9BRAD rbh
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:CEG06934.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
hypothetical protein
scnpilot_expt_750_bf_scaffold_1317_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2618..3400)
DNA (783bp) protein (261aa)
inositol monophosphatase family protein (EC:3.1.3.25)
Inositol monophosphatase family protein n=2 Tax=Bradyrhizobiaceae RepID=F7QG47_9BRAD
Histidinol-phosphate phosphatase HisN {ECO:0000313|EMBL:EKS35261.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia cleve
scnpilot_expt_750_bf_scaffold_1317_5
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4068..4961)
DNA (894bp) protein (298aa)
N-formylglutamate amidohydrolase (EC:3.5.1.68)
Putative N-formylglutamate amidohydrolase {ECO:0000313|EMBL:CAL79859.1}; EC=3.5.1.68 {ECO:0000313|EMBL:CAL79859.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; B
Putative N-formylglutamate amidohydrolase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z133_BRASO
scnpilot_expt_750_bf_scaffold_1317_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5155..5517
DNA (363bp) protein (121aa)
Two-component response regulator n=3 Tax=Bradyrhizobiaceae RepID=F7QG44_9BRAD
Two-component response regulator {ECO:0000313|EMBL:EGP09986.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacteri
response regulator receiver protein
scnpilot_expt_750_bf_scaffold_1317_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5528..5980)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3F1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06938.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
scnpilot_expt_750_bf_scaffold_1317_trna_1
unknown

Not on your lists

6224..6295
DNA (72bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1317_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6414..6938)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4N0_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89893.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
scnpilot_expt_750_bf_scaffold_1317_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7214..7984)
DNA (771bp) protein (257aa)
ABC transporter ATP-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBX2_OLICO rbh
ABC transporter ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI07598.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotrop
scnpilot_expt_750_bf_scaffold_1317_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7981..8985)
DNA (1005bp) protein (335aa)
ABC transporter permease protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBX3_OLICO rbh
ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:AEI07597.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha
scnpilot_expt_750_bf_scaffold_1317_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..10050)
DNA (1056bp) protein (352aa)
ABC transporter substrate-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JBX4_OLICO rbh
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AEI07596.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oli
scnpilot_expt_750_bf_scaffold_1317_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10176..10772)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNI8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30691.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1317_13
unknown

Not on your lists

10986..11228
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1317_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11288..12721
DNA (1434bp) protein (478aa)
gabD; succinate-semialdehyde dehydrogenase (EC:1.2.1.16)
Aldehyde Dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8V0_9BRAD rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFI50588.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_expt_750_bf_scaffold_1317_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12911..14014)
DNA (1104bp) protein (368aa)
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2P0_STAND
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETR76913.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P5
ABC transporter
scnpilot_expt_750_bf_scaffold_1317_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14011..14694)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPU0_AFIFE
ABC transporter permease {ECO:0000313|EMBL:ETR76912.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter permease
Displaying 17 items

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