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scnpilot_expt_750_bf_scaffold_1324

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1324_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..121
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PP23_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42579.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
scnpilot_expt_750_bf_scaffold_1324_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..710)
DNA (573bp) protein (191aa)
Bll7083 protein n=2 Tax=Bradyrhizobium RepID=H7C6R7_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ63448.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
scnpilot_expt_750_bf_scaffold_1324_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1367..2026)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F97C3E
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch diseas
oxidase
scnpilot_expt_750_bf_scaffold_1324_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2244..2858
DNA (615bp) protein (205aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3E1_9BRAD
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFI52471.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia s
cyclic nucleotide-binding protein
scnpilot_expt_750_bf_scaffold_1324_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3169..5439
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F07B91 rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADU42447.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_expt_750_bf_scaffold_1324_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5634..6404
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E69049
Taurine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL02328.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" s
ssuA; putative sulfonate/nitrate transport system substrate-binding protein
scnpilot_expt_750_bf_scaffold_1324_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6401..6970
DNA (570bp) protein (190aa)
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI00035D4FE2
anion ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KDR88364.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; A
scnpilot_expt_750_bf_scaffold_1324_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6930..7133
DNA (204bp) protein (68aa)
ABC transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI00035D4FE2
ABC transporter, membrane spanning protein (Anion) {ECO:0000313|EMBL:EHH07098.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
anion ABC transporter permease
scnpilot_expt_750_bf_scaffold_1324_9
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7115..7867
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF6151 rbh
anion ABC transporter ATPase
ABC transporter, nucleotide binding/ATPase protein (Anion) {ECO:0000313|EMBL:AAK89036.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agro
scnpilot_expt_750_bf_scaffold_1324_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7864..9072
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030F67F9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMS98315.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
scnpilot_expt_750_bf_scaffold_1324_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9185..10570
DNA (1386bp) protein (462aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylo
hemN; oxygen-independent coproporphyrinogen-III oxidase HemN (EC:1.3.99.22)
coproporphyrinogen III oxidase n=1 Tax=Afipia birgiae RepID=UPI00037B1429 rbh
scnpilot_expt_750_bf_scaffold_1324_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10567..10977)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030E0A2C
Uncharacterized protein {ECO:0000313|EMBL:EFI52448.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1324_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11018..11995)
DNA (978bp) protein (326aa)
Peptidase U32 n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV7_OLICO rbh
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:AEI07612.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (st
scnpilot_expt_750_bf_scaffold_1324_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..13003)
DNA (978bp) protein (326aa)
protease n=1 Tax=Afipia birgiae RepID=UPI0002F82EEA rbh
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:AEI07613.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (st
scnpilot_expt_750_bf_scaffold_1324_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12994..13542)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q130E5_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE41544.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_expt_750_bf_scaffold_1324_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13624..15186
DNA (1563bp) protein (521aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD {ECO:0000313|EMBL:AEI07615.1}; EC=4.1.1.- {ECO:0000313|EMBL:AEI07615.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV4_OLICO rbh
scnpilot_expt_750_bf_scaffold_1324_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15178..16206)
DNA (1029bp) protein (343aa)
Glycine oxidase ThiO n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV3_OLICO rbh
thiO2; thiamine biosynthesis oxidoreductase ThiO
Thiamine biosynthesis oxidoreductase ThiO {ECO:0000313|EMBL:AEI07616.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oli
scnpilot_expt_750_bf_scaffold_1324_18
bacterium YEK0313, Bacteria

Not on your lists

comp(16372..17277)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000364050A
Uncharacterized protein {ECO:0000313|EMBL:CEJ14498.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
Displaying 18 items

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