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scnpilot_expt_750_bf_scaffold_2039

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2039_1
unknown

Not on your lists

comp(1..114)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2039_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136..1896)
DNA (1761bp) protein (587aa)
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003004C87 rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AIT08255.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
scnpilot_expt_750_bf_scaffold_2039_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1988..2323
DNA (336bp) protein (112aa)
polysaccharide synthesis protein GtrA n=1 Tax=Sphingomonas elodea RepID=UPI0002630D9B
polysaccharide synthesis protein GtrA
Polysaccharide synthesis protein GtrA {ECO:0000313|EMBL:AJP74587.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
scnpilot_expt_750_bf_scaffold_2039_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2325..2987
DNA (663bp) protein (221aa)
methyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000312242D rbh
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AJP73076.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHS
scnpilot_expt_750_bf_scaffold_2039_5
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2993..3313
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KE16_PSEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY91683.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluore
scnpilot_expt_750_bf_scaffold_2039_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3314..4336)
DNA (1023bp) protein (341aa)
glucosyl transferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F0515D rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AJP73075.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. W
scnpilot_expt_750_bf_scaffold_2039_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4771..5553
DNA (783bp) protein (261aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031E5FE2
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AJP72081.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2039_8
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5547..6932
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00037C7702
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KGB57672.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S
TonB-dependent receptor-like protein
scnpilot_expt_750_bf_scaffold_2039_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6953..7906
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E176BE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72080.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2039_10
unknown

Not on your lists

comp(8008..10032)
DNA (2025bp) protein (675aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2039_11
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10219..10494
DNA (276bp) protein (92aa)
Radical sam domain protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C3Q5_9SPHN
Radical sam domain protein {ECO:0000313|EMBL:EIZ78442.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
radical SAM domain-containing protein
scnpilot_expt_750_bf_scaffold_2039_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10536..12623)
DNA (2088bp) protein (696aa)
GTP pyrophosphokinase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D94 rbh
GTP pyrophosphokinase
GTP pyrophosphokinase {ECO:0000313|EMBL:AJP73074.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_expt_750_bf_scaffold_2039_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12681..12992)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037D7954
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73073.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2039_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13142..13642
DNA (501bp) protein (167aa)
transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630D93
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJP73072.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
scnpilot_expt_750_bf_scaffold_2039_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13712..14452
DNA (741bp) protein (247aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73071.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2039_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14367..14786)
DNA (420bp) protein (140aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D91
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AJP73911.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphi
scnpilot_expt_750_bf_scaffold_2039_17
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14857..15636)
DNA (780bp) protein (260aa)
membrane protein n=1 Tax=Sphingomonas RepID=UPI0002893FAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO39936.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
scnpilot_expt_750_bf_scaffold_2039_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15647..16852)
DNA (1206bp) protein (402aa)
aminotransferase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D90 rbh
aminotransferase
Aminotransferase {ECO:0000313|EMBL:AJP73912.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC
scnpilot_expt_750_bf_scaffold_2039_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16981..18366
DNA (1386bp) protein (462aa)
poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EA0A0A rbh
poly(R)-hydroxyalkanoic acid synthase
Poly(R)-hydroxyalkanoic acid synthase {ECO:0000313|EMBL:AJP73913.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
Displaying 19 items

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