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scnpilot_expt_750_bf_scaffold_2141

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2141_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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48..1880
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630283 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55669.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_expt_750_bf_scaffold_2141_2
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1884..2414)
DNA (531bp) protein (177aa)
Putative reductase protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MEZ2_RHISN
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:CQR54646.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="P
scnpilot_expt_750_bf_scaffold_2141_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2558..4105)
DNA (1548bp) protein (516aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens D
Carboxylesterase type B n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQ05_9SPHN rbh
carboxylesterase type B
scnpilot_expt_750_bf_scaffold_2141_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4102..4992)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630282 rbh
Transcriptional regulatory protein {ECO:0000313|EMBL:CCW18818.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
transcriptional regulator, LysR family
scnpilot_expt_750_bf_scaffold_2141_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5026..5964)
DNA (939bp) protein (313aa)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Sphingomonas elodea RepID=UPI0002630281 rbh
scnpilot_expt_750_bf_scaffold_2141_6
unknown

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comp(6116..7336)
DNA (1221bp) protein (407aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2141_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7338..7859)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631053
DNA, contig: SP657 {ECO:0000313|EMBL:GAN15409.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hypothetical protein
scnpilot_expt_750_bf_scaffold_2141_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7938..9398)
DNA (1461bp) protein (487aa)
membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI00026321A4 rbh
membrane protein
Membrane protein {ECO:0000313|EMBL:AIT08012.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
scnpilot_expt_750_bf_scaffold_2141_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9532..10473
DNA (942bp) protein (314aa)
glycosyl transferase family 2 n=1 Tax=Sphingomonas elodea RepID=UPI00026321A3 rbh
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EZP57471.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
glycosyl transferase family 2
scnpilot_expt_750_bf_scaffold_2141_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10448..11350
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036034A4 rbh
YdjC-like family protein {ECO:0000313|EMBL:EZP57472.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
hypothetical protein
scnpilot_expt_750_bf_scaffold_2141_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11316..11804
DNA (489bp) protein (163aa)
RNA polymerase sigma-70 factor n=1 Tax=Sphingomonas elodea RepID=UPI00026321A1
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIT05927.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
scnpilot_expt_750_bf_scaffold_2141_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11794..12741
DNA (948bp) protein (316aa)
Fe2+-dicitrate sensor membrane component n=1 Tax=Sphingomonas elodea RepID=UPI00026321A0 rbh
FecR family protein {ECO:0000313|EMBL:EZP57474.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. R
hypothetical protein
scnpilot_expt_750_bf_scaffold_2141_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12746..13975
DNA (1230bp) protein (410aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas elodea RepID=UPI000263219F rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AIT08009.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
Displaying 13 items

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