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scnpilot_expt_750_bf_scaffold_2350

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2350_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31..951)
DNA (921bp) protein (307aa)
Putative nucleotidyltransferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5C5_SPHJU rbh
DNA-binding protein rbh
DNA-binding protein {ECO:0000313|EMBL:AJP74656.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. W
scnpilot_expt_750_bf_scaffold_2350_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1163..2086
DNA (924bp) protein (308aa)
SMF protein n=1 Tax=Methylocystis parvus RepID=UPI0002F4E105 rbh
DNA-binding protein {ECO:0000313|EMBL:AJR26920.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2
SMF protein
scnpilot_expt_750_bf_scaffold_2350_3
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2037..2711
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00035FE3A1
Uncharacterized protein {ECO:0000313|EMBL:CCM80218.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
scnpilot_expt_750_bf_scaffold_2350_4
unknown

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comp(2761..2952)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2350_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3134..4057)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V2P5_SPHWW
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP73434.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2350_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4365..5390)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0INY4_9SPHN rbh
DNA primase
DNA primase {ECO:0000313|EMBL:AJP73435.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
scnpilot_expt_750_bf_scaffold_2350_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5405..6556)
DNA (1152bp) protein (384aa)
Probably methylase/helicase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MXA7_9SPHN
putative methylase/helicase
Putative methylase/helicase {ECO:0000313|EMBL:AJA10867.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
Displaying 7 items

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