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scnpilot_expt_750_bf_scaffold_2355

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2355_1
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1586)
DNA (1584bp) protein (528aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=104605 species="Bacteria; Proteobacteria; Alph
ribonuclease R n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036019FE
ribonuclease R
scnpilot_expt_750_bf_scaffold_2355_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1641..3089
DNA (1449bp) protein (483aa)
glycerol-3-phosphate dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC012 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE52922.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
glpD; glycerol-3-phosphate dehydrogenase
scnpilot_expt_750_bf_scaffold_2355_3
unknown

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3086..3433
DNA (348bp) protein (116aa)
hypothetical protein
scnpilot_expt_750_bf_scaffold_2355_4
unknown

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3481..3813
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2355_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3887..4888)
DNA (1002bp) protein (334aa)
pectinesterase (EC:3.1.1.11); K01051 pectinesterase [EC:3.1.1.11] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
pectinesterase (EC:3.1.1.11)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030F9EA9 rbh
scnpilot_expt_750_bf_scaffold_2355_6
unknown

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comp(4885..5478)
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2355_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5556..6158)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631031 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70945.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_2355_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6221..6517)
DNA (297bp) protein (99aa)
Proline--tRNA ligase n=1 Tax=Sphingomonas elodea RepID=SYP_SPHEL
prolyl-tRNA synthetase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_expt_750_bf_scaffold_2355_9
Sphingomonas elodea, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6495..7673)
DNA (1179bp) protein (393aa)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01571}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF
prolyl-tRNA synthetase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000308036D
prolyl-tRNA synthetase
scnpilot_expt_750_bf_scaffold_2355_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7799..8440
DNA (642bp) protein (214aa)
Strain SA-120 Contig157, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01620.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphy
scnpilot_expt_750_bf_scaffold_2355_11
Sphingomonas elodea, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8480..9385
DNA (906bp) protein (302aa)
permease n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F615D3 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AAP57702.1}; TaxID=179878 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
permease rbh
scnpilot_expt_750_bf_scaffold_2355_12
Sphingomonas elodea, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9421..9912)
DNA (492bp) protein (164aa)
SAM-dependent methyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003177C67
Putative uncharacterized protein {ECO:0000313|EMBL:AAP57703.1}; TaxID=179878 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
SAM-dependent methyltransferase
Displaying 12 items

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