ggKbase home page

scnpilot_expt_750_bf_scaffold_2591

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2591_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Sphingomonas elodea RepID=UPI00026316D6
Putative hydrolase {ECO:0000313|EMBL:GAO38943.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changb
RNA-metabolising metallo-beta-lactamase
scnpilot_expt_750_bf_scaffold_2591_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(320..1096)
DNA (777bp) protein (259aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
pantothenate kinase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030EB2CF rbh
pantothenate kinase
scnpilot_expt_750_bf_scaffold_2591_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..3180)
DNA (2073bp) protein (691aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445, ECO:0000313|EMBL:AJP71863.1}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000360CBFE rbh
NADH-quinone oxidoreductase subunit N
scnpilot_expt_750_bf_scaffold_2591_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..4790)
DNA (1611bp) protein (537aa)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E609D6 rbh
NADH-quinone oxidoreductase chain 13
NADH-quinone oxidoreductase chain 13 {ECO:0000313|EMBL:AJP71864.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
scnpilot_expt_750_bf_scaffold_2591_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4787..6868)
DNA (2082bp) protein (694aa)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003183742 rbh
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:AJP71865.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
NADH:ubiquinone oxidoreductase subunit L
scnpilot_expt_750_bf_scaffold_2591_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6868..7173)
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456, ECO:0000313|EMBL:AJP71866.1}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-
NADH-quinone oxidoreductase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E83488
NADH-quinone oxidoreductase subunit K
scnpilot_expt_750_bf_scaffold_2591_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7170..7781)
DNA (612bp) protein (204aa)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031D0404 rbh
NADH:ubiquinone oxidoreductase subunit J
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:AJP74384.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
scnpilot_expt_750_bf_scaffold_2591_8
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7778..8233)
DNA (456bp) protein (152aa)
NADH dehydrogenase subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
NADH dehydrogenase subunit I (EC:1.6.99.5)
NADH dehydrogenase subunit I n=1 Tax=Sphingomonas RepID=UPI0002631A73
scnpilot_expt_750_bf_scaffold_2591_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8233..8667)
DNA (435bp) protein (145aa)
Strain SA-120 Contig349, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01441.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphy
scnpilot_expt_750_bf_scaffold_2591_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..9403)
DNA (735bp) protein (245aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; EC=1.6.99.5 {ECO:0000313|EMBL:AJP71868.1};; NADH dehydrogenase I subunit H {ECO
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Sphingomonas elodea RepID=UPI0002631A74
Displaying 10 items

View Taxonomy