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scnpilot_expt_750_bf_scaffold_2969

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2969_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

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comp(7..615)
DNA (609bp) protein (203aa)
Putative uncharacterized protein id=7719171 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25204.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2969_2
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1059..2063
DNA (1005bp) protein (335aa)
GTPase HflX n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MM73_9MICO
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus
GTP-binding protein
scnpilot_expt_750_bf_scaffold_2969_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2239..3072
DNA (834bp) protein (278aa)
Putative aminopeptidase n=1 Tax=Sphingobium sp. AP49 RepID=J2D6Z5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE57037.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
peptidase M28
scnpilot_expt_750_bf_scaffold_2969_4
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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3095..4054
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SK80_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM98710.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2969_5
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4090..4470)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI0002894CF7
DoxX family protein {ECO:0000313|EMBL:KHA63718.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. An
DoxX family protein
scnpilot_expt_750_bf_scaffold_2969_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4597..4908)
DNA (312bp) protein (104aa)
acylphosphatase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD768
acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:AJP71587.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-
scnpilot_expt_750_bf_scaffold_2969_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4982..5476)
DNA (495bp) protein (165aa)
Transcription elongation factor GreB n=1 Tax=Sphingomonas sp. S17 RepID=F3WSR8_9SPHN
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteob
transcription elongation factor GreB
scnpilot_expt_750_bf_scaffold_2969_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5577..7544)
DNA (1968bp) protein (656aa)
lytic transglycosylase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035D77D9 rbh
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AJP71589.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_expt_750_bf_scaffold_2969_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7607..7906
DNA (300bp) protein (100aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dihydrodipicolinate synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F8D8D9
dihydrodipicolinate synthase
Displaying 9 items

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