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scnpilot_expt_750_bf_scaffold_4000

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_4000_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..97
DNA (96bp) protein (32aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C92F4
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EQB16824.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
scnpilot_expt_750_bf_scaffold_4000_2
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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94..1278
DNA (1185bp) protein (395aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KEQ52732.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KEQ52732.1};; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GDF8_9SPHN rbh
scnpilot_expt_750_bf_scaffold_4000_3
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1275..2057
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I3N7_9GAMM
Enoyl-CoA hydratase {ECO:0000313|EMBL:KKC26992.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SR
enoyl-CoA hydratase/isomerase
scnpilot_expt_750_bf_scaffold_4000_4
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2088..2414
DNA (327bp) protein (109aa)
nitronate monooxygenase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BE59
2-nitropropane dioxygenase {ECO:0000313|EMBL:EZP79234.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
2-nitropropane dioxygenase
scnpilot_expt_750_bf_scaffold_4000_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2523..2981
DNA (459bp) protein (153aa)
Enoyl-[acyl-carrier-protein] reductase [FMN] {ECO:0000313|EMBL:CCW19986.1}; EC=1.3.1.9 {ECO:0000313|EMBL:CCW19986.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona
Enoyl-[acyl-carrier-protein] reductase [FMN] n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MSL9_9SPHN
2-nitropropane dioxygenase
scnpilot_expt_750_bf_scaffold_4000_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2978..4117
DNA (1140bp) protein (380aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV21_BREDI rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EGF96450.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas dim
scnpilot_expt_750_bf_scaffold_4000_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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4114..5136
DNA (1023bp) protein (341aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT9_PARL1 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:GAK44977.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aminoglycoside phosphotransferase
scnpilot_expt_750_bf_scaffold_4000_8
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5243..6490)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037BB745
Uncharacterized protein {ECO:0000313|EMBL:EQB08592.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_expt_750_bf_scaffold_4000_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6502..6819)
DNA (318bp) protein (106aa)
Ferredoxin n=1 Tax=Caulobacter sp. AP07 RepID=J3AGA6_9CAUL
Ferredoxin {ECO:0000313|EMBL:EJL30789.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
ferredoxin
Displaying 9 items

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