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scnpilot_expt_750_bf_scaffold_4226

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_4226_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..694
DNA (693bp) protein (231aa)
RNA polymerase subunit sigma-70 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030F69CA rbh
RNA polymerase subunit sigma-70
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:AJP72233.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
scnpilot_expt_750_bf_scaffold_4226_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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691..1011
DNA (321bp) protein (107aa)
RNA polymerase subunit sigma-70 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030F69CA
RNA polymerase subunit sigma-70
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:AJP72233.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
scnpilot_expt_750_bf_scaffold_4226_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1078..1593
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E425D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74445.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_4226_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1663..2781
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000368DFD7 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP72234.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_4226_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2811..3488
DNA (678bp) protein (226aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:AJP72235.1}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1609977 species="
thymidylate kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A6D rbh
thymidylate kinase rbh
scnpilot_expt_750_bf_scaffold_4226_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3570..4694
DNA (1125bp) protein (375aa)
fumarylacetoacetate hydrolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036BD07A rbh
fumarylacetoacetate hydrolase
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:AJP72236.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
scnpilot_expt_750_bf_scaffold_4226_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4761..4889
DNA (129bp) protein (43aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A6B
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AJP74446.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_4226_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4895..5440
DNA (546bp) protein (182aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A6B
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AJP74446.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_4226_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5444..6331
DNA (888bp) protein (296aa)
gluconolaconase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000309CF7E rbh
gluconolaconase rbh
Gluconolaconase {ECO:0000313|EMBL:AJP72237.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-
scnpilot_expt_750_bf_scaffold_4226_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6405..6863
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF88_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY82101.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
hypothetical protein
scnpilot_expt_750_bf_scaffold_4226_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6907..7581)
DNA (675bp) protein (225aa)
GNAT family acetyltransferase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A05B
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AJP72240.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
scnpilot_expt_750_bf_scaffold_4226_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7628..9340)
DNA (1713bp) protein (571aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AJP72241.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AJP72241.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
dihydroxy-acid dehydratase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030AD501 rbh
scnpilot_expt_750_bf_scaffold_4226_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9490..10998)
DNA (1509bp) protein (503aa)
major facilitator transporter n=1 Tax=Sphingomonas elodea RepID=UPI0002631A67 rbh
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AJP72242.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
Displaying 13 items

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