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scnpilot_expt_750_bf_scaffold_1569

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1569_1
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(89..487)
DNA (399bp) protein (133aa)
sugar transporter n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B492BA
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1569_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(481..1458)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AL93_MARMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1569_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1912..2400)
DNA (489bp) protein (163aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas elodea RepID=UPI0002632216
crossover junction endodeoxyribonuclease RuvC
scnpilot_expt_750_bf_scaffold_1569_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2648..3391)
DNA (744bp) protein (248aa)
transcriptional regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000308126E rbh
Probable transcriptional regulatory protein SR41_13675 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
transcriptional regulator
scnpilot_expt_750_bf_scaffold_1569_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3517..3753)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI0002631638
hypothetical protein
UPF0335 protein TS85_22335 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
scnpilot_expt_750_bf_scaffold_1569_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3818..5488)
DNA (1671bp) protein (557aa)
Beta-lactamase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PLB2_9BURK rbh
Beta-lactamase {ECO:0000313|EMBL:ELX12369.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp.
beta-lactamase
scnpilot_expt_750_bf_scaffold_1569_7
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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5653..6462
DNA (810bp) protein (270aa)
Uncharacterized protein id=4685820 bin=GWA2_Elusimicrobia_69_24 species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
lysophospholipase L1-like esterase Tax=GWA2_Elusimicrobia_69_24_curated
lipolytic protein G-D-S-L family
scnpilot_expt_750_bf_scaffold_1569_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6425..6787)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631636
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73953.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_1569_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6863..8341
DNA (1479bp) protein (493aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:AJP73952.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
pyruvate kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002631635 rbh
pyruvate kinase rbh
scnpilot_expt_750_bf_scaffold_1569_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8378..8989)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037503EA
Sphingomonas taxi strain 30a NODE_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26534.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hydrolase
scnpilot_expt_750_bf_scaffold_1569_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8995..9120)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL36_NOVAD
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_expt_750_bf_scaffold_1569_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9648..9818
DNA (171bp) protein (57aa)
UPI0003D5ECAF related cluster n=1 Tax=unknown RepID=UPI0003D5ECAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73948.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_1569_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9815..10933
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI000263166A rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP73947.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_1569_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10966..11421
DNA (456bp) protein (152aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVF3_9SPHN
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AJP73946.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHS
scnpilot_expt_750_bf_scaffold_1569_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11426..11863)
DNA (438bp) protein (146aa)
RNA polymerase subunit sigma-70 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030F69CA
RNA polymerase subunit sigma-70
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:AJP72233.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
Displaying 15 items

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