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scnpilot_expt_750_bf_scaffold_1680

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1680_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..671)
DNA (669bp) protein (223aa)
molecular chaperone GroEL n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287F170
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1219043 spec
groEL; molecular chaperone GroEL
scnpilot_expt_750_bf_scaffold_1680_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(827..1072)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5BG01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55959.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_expt_750_bf_scaffold_1680_3
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1226..1588
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KHL24508.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter me
scnpilot_expt_750_bf_scaffold_1680_4
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1837..2751
DNA (915bp) protein (305aa)
Transglutaminase n=1 Tax=Sphingobium indicum B90A RepID=I5BFZ2_9SPHN rbh
Transglutaminase {ECO:0000313|EMBL:EIM68494.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90
transglutaminase
scnpilot_expt_750_bf_scaffold_1680_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2810..2989
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO39530.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
scnpilot_expt_750_bf_scaffold_1680_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2946..4103
DNA (1158bp) protein (386aa)
Sodium/calcium exchanger membrane region n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WI21_9SPHN rbh
Calcium:proton antiporter {ECO:0000313|EMBL:KKC26582.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
Sodium/calcium exchanger membrane region
scnpilot_expt_750_bf_scaffold_1680_7
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4162..4569)
DNA (408bp) protein (136aa)
Signal transduction histidine kinase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HYY7_9BRAD
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34314.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
two-component response regulator protein
scnpilot_expt_750_bf_scaffold_1680_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4611..5756)
DNA (1146bp) protein (382aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobiu
Putative two-component regulator sensor histidine kinase protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MKK9_RHIL3 rbh
two-component regulator sensor histidine kinase
scnpilot_expt_750_bf_scaffold_1680_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5749..6591)
DNA (843bp) protein (281aa)
sigma factor sigB regulation protein rsbQ n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003663F31 rbh
Sigma factor sigB regulation protein rsbQ {ECO:0000313|EMBL:KGT79568.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
hypothetical protein
scnpilot_expt_750_bf_scaffold_1680_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7017..7460
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020H6_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84677.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
scnpilot_expt_750_bf_scaffold_1680_11
unknown

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7608..7892
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1680_12
Sphingomonas sp. A4, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7823..8212)
DNA (390bp) protein (130aa)
transposase IS4 n=1 Tax=Sphingomonadaceae RepID=UPI0003B5A84A
Putative transposase {ECO:0000313|EMBL:BAE93946.1}; TaxID=223555 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A
Transposase
scnpilot_expt_750_bf_scaffold_1680_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9095..9550
DNA (456bp) protein (152aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ABZ71542.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ABZ71542.1};; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobact
Alpha-N-arabinofuranosidase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SVS4_CAUSK
Displaying 13 items

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