ggKbase home page

scnpilot_expt_750_bf_scaffold_1749

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1749_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..512
DNA (510bp) protein (170aa)
AMP-dependent synthetase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCEA1
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABZ71987.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulob
scnpilot_expt_750_bf_scaffold_1749_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(801..2429)
DNA (1629bp) protein (543aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
carboxylesterase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCEA2 rbh
carboxylesterase
scnpilot_expt_750_bf_scaffold_1749_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2426..3703)
DNA (1278bp) protein (426aa)
MFS transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA6C5 rbh
major facilitator transporter Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
major facilitator transporter
scnpilot_expt_750_bf_scaffold_1749_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3839..4525
DNA (687bp) protein (229aa)
Transcriptional regulator, TetR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFK5_PHEZH rbh
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACG77086.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
scnpilot_expt_750_bf_scaffold_1749_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4609..5502
DNA (894bp) protein (298aa)
Short-chain alcohol dehydrogenase-like protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFK9_PHEZH rbh
short-chain alcohol dehydrogenase-like protein rbh
Short-chain alcohol dehydrogenase-like protein {ECO:0000313|EMBL:ACG77090.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;
scnpilot_expt_750_bf_scaffold_1749_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5499..6815
DNA (1317bp) protein (439aa)
Glycoside hydrolase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UYI2_9SPHN
Glycoside hydrolase family protein {ECO:0000313|EMBL:ENY83289.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
glycoside hydrolase family protein
scnpilot_expt_750_bf_scaffold_1749_7
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6998..8530)
DNA (1533bp) protein (511aa)
ABC transporter related n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFW6_SPHWW
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABQ71182.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
scnpilot_expt_750_bf_scaffold_1749_8
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8813..9112
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB6E
Uncharacterized protein {ECO:0000313|EMBL:KER82223.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arbori
hypothetical protein
scnpilot_expt_750_bf_scaffold_1749_9
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9130..10452
DNA (1323bp) protein (441aa)
MFS transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B618D4 rbh
Transporter, major facilitator family {ECO:0000313|EMBL:EDX80620.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
major facilitator superfamily protein
scnpilot_expt_750_bf_scaffold_1749_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10310..11812)
DNA (1503bp) protein (501aa)
MFS transporter n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C182 rbh
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:EJK82746.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sourc
major facilitator superfamily transporter
Displaying 10 items

View Taxonomy