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scnpilot_expt_750_bf_scaffold_907

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_907_1
Azoarcus sp. CIB, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1..306
DNA (306bp) protein (102aa)
Putative 3-methylbenzoate transporter ATPase n=1 Tax=Azoarcus sp. CIB RepID=K4Q688_9RHOO
Putative 3-methylbenzoate transporter ATPase {ECO:0000313|EMBL:CCH23035.1}; TaxID=198107 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoar
livG; branched-chain amino acid ABC transporter, ATP-binding protein
scnpilot_expt_750_bf_scaffold_907_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303..1022
DNA (720bp) protein (240aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IR19_RHOP2
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABD09341.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_expt_750_bf_scaffold_907_3
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1192..1971
DNA (780bp) protein (260aa)
lactonase (EC:3.8.1.5) Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Lactonase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V3T9_DESML
alpha/beta family hydrolase
scnpilot_expt_750_bf_scaffold_907_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1992..2897
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AYJ2_9RHIZ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56209.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
scnpilot_expt_750_bf_scaffold_907_5
bacterium YEK0313, Bacteria

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comp(2943..4172)
DNA (1230bp) protein (410aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034738B5
Uncharacterized protein {ECO:0000313|EMBL:CEJ11613.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ilvJ; leucine/isoleucine/valine-binding protein
scnpilot_expt_750_bf_scaffold_907_6
bacterium YEK0313, Bacteria

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comp(4232..4960)
DNA (729bp) protein (243aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J3CL28_9BURK
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CEJ11614.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
inner-membrane translocator
scnpilot_expt_750_bf_scaffold_907_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5058..5318
DNA (261bp) protein (87aa)
excinuclease ABC subunit B n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4F3
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
scnpilot_expt_750_bf_scaffold_907_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5325..6275
DNA (951bp) protein (317aa)
excinuclease ABC subunit B n=1 Tax=Sphingomonas elodea RepID=UPI00026316C2
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
scnpilot_expt_750_bf_scaffold_907_9
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6447..7853
DNA (1407bp) protein (469aa)
pentapeptide repeat-containing protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E99E rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB58574.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
pentapeptide repeat-containing protein
scnpilot_expt_750_bf_scaffold_907_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7942..8484
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD28
Putative lipoprotein {ECO:0000313|EMBL:EZP55557.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_907_11
unknown

Not on your lists

8526..8717
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_907_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9214..9966)
DNA (753bp) protein (251aa)
TonB-like protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630405
DNA, contig: SP624 {ECO:0000313|EMBL:GAN13732.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
energy transducer TonB
scnpilot_expt_750_bf_scaffold_907_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10091..10408
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630404
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT07215.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
scnpilot_expt_750_bf_scaffold_907_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10412..11476)
DNA (1065bp) protein (355aa)
Threonine aldolase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQD2_9SPHN
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP73986.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_907_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11560..13356
DNA (1797bp) protein (599aa)
X-Pro aminopeptidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D40D83 rbh
X-Pro aminopeptidase
X-Pro aminopeptidase {ECO:0000313|EMBL:AJP74739.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_expt_750_bf_scaffold_907_16
unknown

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13323..13472
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_907_17
unknown

Not on your lists

comp(13427..13666)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_907_trna_1
unknown

Not on your lists

13717..13788
DNA (72bp)
transferRNA
scnpilot_expt_750_bf_scaffold_907_18
unknown

Not on your lists

14111..14473
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_907_19
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14612..14896
DNA (285bp) protein (95aa)
Transcriptional regulator, ArsR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ25_SPHAL
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABF54247.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
scnpilot_expt_750_bf_scaffold_907_20
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14893..15843
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003460166 rbh
arsenate reductase
Arsenate reductase {ECO:0000313|EMBL:ABL71415.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans
scnpilot_expt_750_bf_scaffold_907_21
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15840..16484
DNA (645bp) protein (215aa)
MIP family protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000375C055 rbh
MIP family protein {ECO:0000313|EMBL:ETI59471.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100
putative MIP family permease
scnpilot_expt_750_bf_scaffold_907_22
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16481..17257
DNA (777bp) protein (259aa)
Possible arsH protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB9_9SPHN
Possible arsH protein {ECO:0000313|EMBL:BAF03423.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
arsenic resistance protein ArsH
scnpilot_expt_750_bf_scaffold_907_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17681..18223
DNA (543bp) protein (181aa)
LuxR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJU1_9SPHN
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AJP74187.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
Displaying 24 items

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