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scnpilot_expt_750_bf_scaffold_3280

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3280_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..620)
DNA (618bp) protein (206aa)
MFS transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000307E989
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJP72658.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-
scnpilot_expt_750_bf_scaffold_3280_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(632..1216)
DNA (585bp) protein (195aa)
MFS transporter n=1 Tax=Sphingomonas elodea RepID=UPI0002631346
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJP72658.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-
scnpilot_expt_750_bf_scaffold_3280_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1351..1884)
DNA (534bp) protein (178aa)
LacI family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4E6_9SPHN
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AGH50641.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
scnpilot_expt_750_bf_scaffold_3280_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2391..3908
DNA (1518bp) protein (506aa)
Major facilitator superfamily protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3M5_9SPHN rbh
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AGH50640.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
scnpilot_expt_750_bf_scaffold_3280_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4282..5436)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9AA22_CAUCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK22771.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
scnpilot_expt_750_bf_scaffold_3280_6
unknown

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comp(5475..5687)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3280_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5898..7703
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036A4748 rbh
TonB-dependent receptor {ECO:0000313|EMBL:EJL27514.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
tonb-dependent receptor
scnpilot_expt_750_bf_scaffold_3280_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7773..9338
DNA (1566bp) protein (522aa)
Tryptophan halogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S802_9SPHN rbh
tryptophan halogenase rbh
Tryptophan halogenase {ECO:0000313|EMBL:AGH50639.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_expt_750_bf_scaffold_3280_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9335..10828
DNA (1494bp) protein (498aa)
Tryptophan halogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6T0_9SPHN rbh
tryptophan halogenase
Tryptophan halogenase {ECO:0000313|EMBL:AGH50638.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_expt_750_bf_scaffold_3280_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..11760
DNA (912bp) protein (304aa)
Transcription factor jumonji jmjc domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SJ74_9SPHN rbh
transcription factor jumonji jmjc domain-containing protein
Transcription factor jumonji jmjc domain-containing protein {ECO:0000313|EMBL:AGH50637.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
scnpilot_expt_750_bf_scaffold_3280_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11784..13805
DNA (2022bp) protein (674aa)
Alpha-glucosidase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4E1_9SPHN rbh
Alpha-glucosidase {ECO:0000313|EMBL:AGH50636.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1
alpha-glucosidase
scnpilot_expt_750_bf_scaffold_3280_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14032..14583
DNA (552bp) protein (184aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D37051
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AIT06997.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
scnpilot_expt_750_bf_scaffold_3280_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14583..14834
DNA (252bp) protein (84aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030054C6
molybdenum cofactor biosynthesis protein MoaD
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
scnpilot_expt_750_bf_scaffold_3280_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14831..15271
DNA (441bp) protein (147aa)
molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D76EB1
molybdopterin synthase catalytic subunit
Molybdopterin synthase catalytic subunit {ECO:0000313|EMBL:AJP72655.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
scnpilot_expt_750_bf_scaffold_3280_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15333..16136)
DNA (804bp) protein (268aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B480EF
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP72652.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
scnpilot_expt_750_bf_scaffold_3280_16
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16228..17805)
DNA (1578bp) protein (526aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Sphingobium baderi LL03 RepID=T0HJL1_9SPHN rbh
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EQA99539.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source=
alkyl hydroperoxide reductase
scnpilot_expt_750_bf_scaffold_3280_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17917..18480)
DNA (564bp) protein (188aa)
alkyl hydroperoxide reductase subunit C n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002FC97E7 rbh
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AIT08195.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
scnpilot_expt_750_bf_scaffold_3280_18
unknown

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comp(18818..18901)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 18 items

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