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scnpilot_expt_750_bf_scaffold_3370

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3370_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..896)
DNA (894bp) protein (298aa)
acetyl-CoA carboxylase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DD9753
acetyl-CoA carboxylase
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AJP71815.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_expt_750_bf_scaffold_3370_2
unknown

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comp(896..1177)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3370_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1174..2175)
DNA (1002bp) protein (334aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1219050 species="Bacteria; Proteob
biotin synthase (EC:2.8.1.6)
biotin synthase n=1 Tax=Sphingomonas elodea RepID=UPI0002630D53 rbh
scnpilot_expt_750_bf_scaffold_3370_4
unknown

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comp(2165..2839)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3370_5
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3787..4875)
DNA (1089bp) protein (363aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4P8_9SPHN
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_expt_750_bf_scaffold_3370_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4985..5407)
DNA (423bp) protein (141aa)
methylmalonyl-CoA epimerase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EB02FD
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KKC26122.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
methylmalonyl-CoA epimerase
scnpilot_expt_750_bf_scaffold_3370_7
unknown

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comp(5411..5818)
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3370_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6903)
DNA (1077bp) protein (359aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000377AAC8
methylmalonyl-CoA carboxyltransferase
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:AJP74378.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
scnpilot_expt_750_bf_scaffold_3370_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6867..7304)
DNA (438bp) protein (146aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000377AAC8
methylmalonyl-CoA carboxyltransferase
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:AJP74378.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
scnpilot_expt_750_bf_scaffold_3370_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7466..8863
DNA (1398bp) protein (466aa)
XRE family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002630D58 rbh
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AJP71819.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
scnpilot_expt_750_bf_scaffold_3370_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8957..9715
DNA (759bp) protein (253aa)
aldolase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003199A4C rbh
aldolase
Aldolase {ECO:0000313|EMBL:AJP71821.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
scnpilot_expt_750_bf_scaffold_3370_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9798..10598)
DNA (801bp) protein (267aa)
aromatic ring-cleaving dioxygenase n=1 Tax=Sphingomonas elodea RepID=UPI00026313D7 rbh
aromatic ring-opening dioxygenase LigA
Aromatic ring-opening dioxygenase LigA {ECO:0000313|EMBL:AJP71823.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
scnpilot_expt_750_bf_scaffold_3370_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10676..11188
DNA (513bp) protein (171aa)
isoquinoline 1-oxidoreductase n=1 Tax=Sphingomonas elodea RepID=UPI00026313D6
isoquinoline 1-oxidoreductase
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:AJP71824.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
scnpilot_expt_750_bf_scaffold_3370_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11310..11861
DNA (552bp) protein (184aa)
membrane protein n=1 Tax=Sphingomonas wittichii RepID=UPI00030061F8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74379.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
Displaying 14 items

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