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scnpilot_expt_750_bf_scaffold_928_4

Organism: SCNPILOT_EXPT_750_BF_Sphingomonas_67_7_partial

near complete RP 47 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 9 / 38
Location: comp(2562..3110)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E2CA52 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 174.0
  • Bit_score: 289
  • Evalue 1.90e-75
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 174.0
  • Bit_score: 313
  • Evalue 4.60e-83
DNA repair protein RadC {ECO:0000313|EMBL:AJP71051.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 174.0
  • Bit_score: 313
  • Evalue 2.30e-82

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCCGAACGTTCCGACAATAGCGGCCACCGCGCGCGCCTGCGCCGCCGCCTGTTCGAGGGCGGGCCGGACGCGCTGCTCGATCACGAACTCGTCGAATACCTCCTCGCACTGGCGATTCCCCGGCAGGATACCAAGCCGCTGGCCAGGGCGCTGCTCCACGAATTCGGCGGCATCGCCGGGCTTCTCACTGCGGATGCCGAGGCGCTGGCGCGCGTGAAGGGCATGGGCGAGACCAGCGTCGCCGCCTTGAAGACGGCCCATGCCGCGGCGCTCCGCCTGCTGCGCGCCGAAGTCGCCGAGCGCCCGGTACTCGCCAATTGGCAGGCATTGCTCGATTATCTGCGCGCCGACATGGCCCATCATGCGATCGAGCGCTTCCGCGTCCTCCATCTCAATTCCAAGAACATGCTGATCCGCGACGAGCTGATGGGCGAAGGCACGATCGACGAGGCCGCCGTCTATGTCCGCGAAGTGATCCGGCGCGCGATCGAGCTCGGCTCCGCGGCGCTGATCCTTGTCCACAACCACCCCACTTGGTCATTTTGA
PROTEIN sequence
Length: 183
MSERSDNSGHRARLRRRLFEGGPDALLDHELVEYLLALAIPRQDTKPLARALLHEFGGIAGLLTADAEALARVKGMGETSVAALKTAHAAALRLLRAEVAERPVLANWQALLDYLRADMAHHAIERFRVLHLNSKNMLIRDELMGEGTIDEAAVYVREVIRRAIELGSAALILVHNHPTWSF*