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scnpilot_expt_750_bf_scaffold_928

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_928_1
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..616
DNA (615bp) protein (205aa)
TrwC protein n=1 Tax=Sphingomonas melonis RepID=UPI00037AE02E
DNA relaxase {ECO:0000313|EMBL:EXS71107.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
TrwC protein
scnpilot_expt_750_bf_scaffold_928_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

606..1115
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036FC3FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93101.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_expt_750_bf_scaffold_928_3
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1166..2407)
DNA (1242bp) protein (414aa)
Integrase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GBY7_9SPHN
Integrase {ECO:0000313|EMBL:EQA98166.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25
integrase
scnpilot_expt_750_bf_scaffold_928_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2562..3110)
DNA (549bp) protein (183aa)
DNA repair protein RadC n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E2CA52
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AJP71051.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_928_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3250..3603
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026302F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48946.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_expt_750_bf_scaffold_928_6
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3600..4373
DNA (774bp) protein (258aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E0A732 rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
scnpilot_expt_750_bf_scaffold_928_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4418..4651
DNA (234bp) protein (78aa)
F0F1 ATP synthase subunit C n=1 Tax=Sphingomonas RepID=UPI00026302EF
ATP synthase subunit C
ATP synthase subunit C {ECO:0000313|EMBL:AJP71054.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_expt_750_bf_scaffold_928_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4668..5162
DNA (495bp) protein (165aa)
H+-transporting two-sector ATPase subunit B/B'''' n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287CBB8
H+-transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
scnpilot_expt_750_bf_scaffold_928_9
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5155..5706
DNA (552bp) protein (184aa)
ATP synthase subunit B n=1 Tax=Sphingomonas elodea RepID=UPI00026302ED
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
hypothetical protein
scnpilot_expt_750_bf_scaffold_928_10
unknown

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5824..6015
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_928_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6062..6811)
DNA (750bp) protein (250aa)
Putative methyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2H5L2_9CAUL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71058.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_expt_750_bf_scaffold_928_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6959..8881
DNA (1923bp) protein (641aa)
excinuclease ABC subunit C n=1 Tax=Sphingomonas elodea RepID=UPI00026302EB rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit C rbh
scnpilot_expt_750_bf_scaffold_928_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8979..11774
DNA (2796bp) protein (932aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026302E9 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJP71060.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_expt_750_bf_scaffold_928_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11803..12783
DNA (981bp) protein (327aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8DE rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:AJP71062.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomona
scnpilot_expt_750_bf_scaffold_928_15
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12780..13733
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8DD rbh
Uncharacterized protein {ECO:0000313|EMBL:KHA64090.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
hypothetical protein
scnpilot_expt_750_bf_scaffold_928_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13779..14510
DNA (732bp) protein (244aa)
DNA repair protein RecO n=1 Tax=Sphingomonas elodea RepID=UPI0002630469 rbh
DNA recombination protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1609977 species="Bacteria; Proteobacteria; Al
scnpilot_expt_750_bf_scaffold_928_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14559..15611
DNA (1053bp) protein (351aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D6FE1C rbh
3-isopropylmalate dehydrogenase
scnpilot_expt_750_bf_scaffold_928_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15608..15721
DNA (114bp) protein (38aa)
Dolichol monophosphate mannose synthase {ECO:0000313|EMBL:AJP71066.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
Displaying 18 items

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