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scnpilot_expt_750_bf_scaffold_2066

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2066_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2135
DNA (2133bp) protein (711aa)
Cation/multidrug efflux pump n=1 Tax=Acidovorax sp. CF316 RepID=J1ELI7_9BURK
Cation/multidrug efflux pump {ECO:0000313|EMBL:EJE53034.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_2066_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2132..3541
DNA (1410bp) protein (470aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXL4_ALIDB
rnd efflux system, outer membrane lipoprotein, nodt family
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADV00782.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
scnpilot_expt_750_bf_scaffold_2066_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3530..3886)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W7F4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35613.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_expt_750_bf_scaffold_2066_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3912..4529
DNA (618bp) protein (206aa)
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1ELI3_9BURK
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:EJE53029.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
ABC transporter
scnpilot_expt_750_bf_scaffold_2066_5
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4603..5418)
DNA (816bp) protein (272aa)
Response regulator of the LytR/AlgR family n=1 Tax=Acidovorax sp. CF316 PF5_9BURK">RepID=J0KPF5_9BURK
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:EJE53048.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
response regulator LytTR
scnpilot_expt_750_bf_scaffold_2066_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5415..6470)
DNA (1056bp) protein (352aa)
Signal transduction histidine kinase, LytS n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDW6_ALIDK
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:AEB83783.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_expt_750_bf_scaffold_2066_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6627..7103)
DNA (477bp) protein (159aa)
Putative dienelactone hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J3CPR3_9BURK
Putative dienelactone hydrolase {ECO:0000313|EMBL:EJL76024.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
alpha/beta hydrolase family protein
scnpilot_expt_750_bf_scaffold_2066_8
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7694..7987)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZ09_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP49838.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_expt_750_bf_scaffold_2066_9
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8011..8571)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ELK3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE53054.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.
hypothetical protein
scnpilot_expt_750_bf_scaffold_2066_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8909..10195
DNA (1287bp) protein (429aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T976_ACIDE
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:EER58974.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_expt_750_bf_scaffold_2066_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10174..11664)
DNA (1491bp) protein (497aa)
FAD linked oxidase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T975_ACIDE rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:EER58973.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
FAD linked oxidase domain-containing protein
scnpilot_expt_750_bf_scaffold_2066_12
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11837..12664
DNA (828bp) protein (276aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27) Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27) id=12552738 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
scnpilot_expt_750_bf_scaffold_2066_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13104..13433
DNA (330bp) protein (110aa)
hypothetical protein id=12552737 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2066_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13555..15345)
DNA (1791bp) protein (597aa)
FAD linked oxidase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRV8_9BURK
diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
diguanylate cyclase
scnpilot_expt_750_bf_scaffold_2066_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15422..16240)
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T974_ACIDE
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EER58972.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax d
alpha/beta fold family hydrolase
scnpilot_expt_750_bf_scaffold_2066_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16296..17120)
DNA (825bp) protein (275aa)
proteasome-type protease id=12552734 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
proteasome-type protease Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
proteasome-type protease
scnpilot_expt_750_bf_scaffold_2066_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17176..17883
DNA (708bp) protein (236aa)
hypothetical protein id=12552733 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
esterase/lipase Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2066_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17910..18320
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW4_9BURK
esterase/lipase Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_expt_750_bf_scaffold_2066_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18527..20986)
DNA (2460bp) protein (820aa)
DNA mismatch repair protein MutS n=1 Tax=Acidovorax radicis RepID=UPI00023777EF
DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
DNA mismatch repair protein MutS
Displaying 19 items

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