ggKbase home page

scnpilot_expt_750_bf_scaffold_2159

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2159_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..858
DNA (858bp) protein (286aa)
yhhn family protein id=12552590 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
yhhn family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
YhhN family protein
scnpilot_expt_750_bf_scaffold_2159_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(859..1509)
DNA (651bp) protein (217aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2] id=12552589 bin=BDI species=Duganella zoogloeoides genus=Duganella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Maleylacetoacetate isomerase / Glutathione S-transferase, zeta (EC:2.5.1.18 5.2.1.2)
scnpilot_expt_750_bf_scaffold_2159_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1512..2534)
DNA (1023bp) protein (341aa)
fumarylacetoacetate (FAA) hydrolase id=12552588 bin=BDI tax=BDI organism_group=Betaproteobacteria rbh
fumarylacetoacetate hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Fumarylacetoacetate hydrolase family protein
scnpilot_expt_750_bf_scaffold_2159_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2614..3534)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B0U1_9RHOO
C4-dicarboxylate transport system C4-dicarboxylate-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_2159_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3584..4861)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AUA6_9RHOO rbh
TRAP dicarboxylate transporter large permease protein Tax=CG_Rhodocyc_01
TRAP-type C4-dicarboxylate transport system, large permease component
scnpilot_expt_750_bf_scaffold_2159_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4858..5415)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZGB3_9RHOO
tripartite ATP-independent periplasmic transporter DctQ Tax=CG_Rhodocyc_01
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
scnpilot_expt_750_bf_scaffold_2159_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5449..5991)
DNA (543bp) protein (181aa)
glyoxalase-family protein (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5] id=12552587 bin=BDI species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glyoxalase-family protein (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glyoxalase-family protein
scnpilot_expt_750_bf_scaffold_2159_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6146..7063
DNA (918bp) protein (306aa)
LysR family transcriptional regulator id=12552586 bin=BDI species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
bacterial regulatory helix-turn-helix , lysR family protein
scnpilot_expt_750_bf_scaffold_2159_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7082..7924)
DNA (843bp) protein (281aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6T5_ACIDE rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EER59821.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
scnpilot_expt_750_bf_scaffold_2159_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8117..8485
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6T4_ACIDE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2159_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8482..9672
DNA (1191bp) protein (397aa)
cytochrome d1 heme subunit id=12552582 bin=BDI species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cytochrome d1 heme subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nirF; heme d1 biosynthesis protein NirF
scnpilot_expt_750_bf_scaffold_2159_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10088..10633
DNA (546bp) protein (182aa)
AsnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
AsnC family transcriptional regulator id=12552581 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
AsnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2159_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10617..11087
DNA (471bp) protein (157aa)
AsnC family transcriptional regulator id=12552580 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:EER59816.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
AsnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2159_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11077..11568
DNA (492bp) protein (164aa)
AsnC family transcriptional regulator id=12552579 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
AsnC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
AsnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2159_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11571..11771
DNA (201bp) protein (67aa)
nirJ; heme d1 biosynthesis protein NirJ id=12552578 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
nirJ; heme d1 biosynthesis protein NirJ Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
radical sam domain-containing protein
Displaying 15 items

View Taxonomy