ggKbase home page

scnpilot_expt_750_bf_scaffold_1137

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1137_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..115
DNA (114bp) protein (38aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT62_9BURK
scnpilot_expt_750_bf_scaffold_1137_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143..556
DNA (414bp) protein (138aa)
Class I peptide chain release factor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVV4_9BURK
class I peptide chain release factor
Class I peptide chain release factor {ECO:0000313|EMBL:AFU47003.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
scnpilot_expt_750_bf_scaffold_1137_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

717..1547
DNA (831bp) protein (277aa)
Extradiol ring-cleavage dioxygenase III subunit B n=1 Tax=Acidovorax sp. KKS102 RepID=K0I230_9BURK rbh
extradiol ring-cleavage dioxygenase III subunit B
Extradiol ring-cleavage dioxygenase III subunit B {ECO:0000313|EMBL:AFU47002.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_expt_750_bf_scaffold_1137_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1606..2286
DNA (681bp) protein (227aa)
Phospholipase/carboxylesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICI0_9BURK
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:AFU47001.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_expt_750_bf_scaffold_1137_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2349..3239
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023762A4 rbh
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1137_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3273..3740)
DNA (468bp) protein (156aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023762A7
Transcriptional regulator {ECO:0000313|EMBL:EJE52506.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="
asnC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1137_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3843..6509
DNA (2667bp) protein (889aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax sp. KKS102 RepID=K0I224_9BURK rbh
2-oxoacid dehydrogenase subunit E1
scnpilot_expt_750_bf_scaffold_1137_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6964..7788)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3A9_9BURK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46995.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_expt_750_bf_scaffold_1137_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7835..8626)
DNA (792bp) protein (264aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylgluco
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I707_9BURK rbh
metallophosphoesterase rbh
scnpilot_expt_750_bf_scaffold_1137_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8648..9175)
DNA (528bp) protein (176aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVT7_9BURK rbh
cyclophilin type peptidyl-prolyl cis-trans isomerase
scnpilot_expt_750_bf_scaffold_1137_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9197..9778)
DNA (582bp) protein (194aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I218_9BURK rbh
peptidyl-prolyl isomerase
scnpilot_expt_750_bf_scaffold_1137_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9775..11082)
DNA (1308bp) protein (436aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICG1_9BURK rbh
ErfK/YbiS/YcfS/YnhG protein
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:AFU46991.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_expt_750_bf_scaffold_1137_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11153..12448)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3A6_9BURK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46990.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
scnpilot_expt_750_bf_scaffold_1137_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12473..13855
DNA (1383bp) protein (461aa)
cysS; cysteinyl-tRNA ligase (EC:6.1.1.16) rbh
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I700_9BURK rbh
scnpilot_expt_750_bf_scaffold_1137_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13903..14577
DNA (675bp) protein (225aa)
HhH-GPD family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVS6_9BURK rbh
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:AFU46988.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;
scnpilot_expt_750_bf_scaffold_1137_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14656..15633
DNA (978bp) protein (326aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I213_9BURK rbh
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
scnpilot_expt_750_bf_scaffold_1137_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15824..17677
DNA (1854bp) protein (618aa)
Cache sensor-containing methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICF1_9BURK rbh
Cache sensor-containing methyl-accepting chemotaxis sensory transducer
Cache sensor-containing methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU46986.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
scnpilot_expt_750_bf_scaffold_1137_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17849..18799
DNA (951bp) protein (317aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00054821};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3A3_9BURK rbh
tRNA(Ile)-lysidine synthetase
scnpilot_expt_750_bf_scaffold_1137_19
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19217..20431
DNA (1215bp) protein (405aa)
Phage integrase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YR5_RHOFD rbh
phage integrase
Phage integrase {ECO:0000313|EMBL:ABD69088.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (stra
scnpilot_expt_750_bf_scaffold_1137_20
unknown

Not on your lists

21007..21390
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1137_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21430..22035)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YR3_RHOFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD69090.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
scnpilot_expt_750_bf_scaffold_1137_22
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22174..22989)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YR2_RHOFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD69091.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
scnpilot_expt_750_bf_scaffold_1137_23
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(22999..23370)
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
scnpilot_expt_750_bf_scaffold_1137_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23370..26291)
DNA (2922bp) protein (974aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379ECC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD22645.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1137_25
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26389..26646)
DNA (258bp) protein (86aa)
Putative transcriptional regulator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YQ8_RHOFD
putative transcriptional regulator; K07733 prophage regulatory protein Tax=CG_Rhodof_01
putative transcriptional regulator
scnpilot_expt_750_bf_scaffold_1137_26
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26743..27957)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YNG0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EXI91945.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1137_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28093..30093
DNA (2001bp) protein (667aa)
putative type I restriction-modification system, N-6 adenine-specific DNA methylase (EC:2.1.1.72) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
putative type I restriction-modification system, N-6 adenine-specific DNA methylase (EC:2.1.1.72)
Putative Type I restriction-modification system, N-6 adenine-specific DNA methylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG25_9BACT rbh
Displaying 27 items

View Taxonomy