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scnpilot_expt_750_bf_scaffold_1484

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1484_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..505
DNA (504bp) protein (168aa)
Type I secretion system ATPase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3K5_ACISJ
type I secretion system ATPase
Type I secretion system ATPase {ECO:0000313|EMBL:ABM40830.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_expt_750_bf_scaffold_1484_2
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1496..1864
DNA (369bp) protein (123aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Acidovorax sp. CF316 RepID=J1E9V0_9BURK
type I secretion membrane fusion protein, HlyD family Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
HlyD family type I secretion membrane fusion protein
scnpilot_expt_750_bf_scaffold_1484_3
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1868..2752
DNA (885bp) protein (295aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Acidovorax sp. CF316 RepID=J0K4X1_9BURK
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EJE49005.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
TolC family type I secretion outer membrane protein
scnpilot_expt_750_bf_scaffold_1484_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2716..3201
DNA (486bp) protein (162aa)
TolC family type I secretion outer membrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I612_9BURK
TolC family type I secretion outer membrane protein
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:AFU44371.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
scnpilot_expt_750_bf_scaffold_1484_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3208..3990
DNA (783bp) protein (261aa)
Glycosyl transferase, family 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1F2_ACIDE rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EER61710.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
glycosyl transferase family protein rbh
scnpilot_expt_750_bf_scaffold_1484_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3987..5087
DNA (1101bp) protein (367aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Acidovorax sp. CF316 RepID=J1E9C5_9BURK rbh
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glycosyl transferase family protein
scnpilot_expt_750_bf_scaffold_1484_7
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5095..5952
DNA (858bp) protein (286aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
acetylglutamate kinase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B0FA
argB; acetylglutamate kinase
scnpilot_expt_750_bf_scaffold_1484_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5954..6595
DNA (642bp) protein (214aa)
TetR family transcriptional regulator; K05501 TetR/AcrR family transcriptional regulator id=12549571 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator; K05501 TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1484_9
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6715..7332
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSZ7_POLNA
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABM38775.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
scnpilot_expt_750_bf_scaffold_1484_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7337..9133
DNA (1797bp) protein (599aa)
acyl-CoA dehydrogenase-like protein; K00257 [EC:1.3.99.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
acyl-CoA dehydrogenase-like protein; K00257 [EC:1.3.99.-] id=12549569 bin=BDI species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
acyl-CoA dehydrogenase-like protein
scnpilot_expt_750_bf_scaffold_1484_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9181..9618
DNA (438bp) protein (146aa)
hypothetical protein id=12549568 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1484_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9677..11965
DNA (2289bp) protein (763aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY46_ALIDB
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO26378.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
3-hydroxyacyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_1484_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11967..12527
DNA (561bp) protein (187aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12549566 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_expt_750_bf_scaffold_1484_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12538..13731
DNA (1194bp) protein (398aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1G4_ACIDE rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EER61722.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafi
scnpilot_expt_750_bf_scaffold_1484_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13943..14824
DNA (882bp) protein (294aa)
Putative hydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1G5_ACIDE rbh
Putative hydrolase {ECO:0000313|EMBL:EER61723.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.
hydrolase
scnpilot_expt_750_bf_scaffold_1484_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14853..15680
DNA (828bp) protein (276aa)
hypothetical protein id=12549560 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1484_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15718..16494
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/isomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TY49_ALIDB rbh
enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
enoyl-CoA hydratase/isomerase
scnpilot_expt_750_bf_scaffold_1484_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16597..17079
DNA (483bp) protein (161aa)
thioesterase n=1 Tax=Acidovorax radicis RepID=UPI0002375C07
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1484_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17220..17756
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12553078 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_expt_750_bf_scaffold_1484_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17947..18633
DNA (687bp) protein (229aa)
TetR family transcriptional regulator id=12553079 bin=BDI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
TetR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1484_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18633..19406
DNA (774bp) protein (258aa)
enoyl-CoA hydratase id=12553080 bin=BDI species=Cupriavidus sp. UYPR2.512 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
enoyl-CoA hydratase
scnpilot_expt_750_bf_scaffold_1484_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19425..19835)
DNA (411bp) protein (137aa)
thioesterase superfamily protein id=12551140 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
thioesterase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
thioesterase superfamily protein
scnpilot_expt_750_bf_scaffold_1484_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19877..20398
DNA (522bp) protein (174aa)
ABC transporter permease and ATPase id=12551141 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter permease and ATPase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ABC transporter
scnpilot_expt_750_bf_scaffold_1484_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20395..21609
DNA (1215bp) protein (405aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEB83059.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEB83059.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Xenobiotic-transporting ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5G7_ALIDK
scnpilot_expt_750_bf_scaffold_1484_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21703..22737)
DNA (1035bp) protein (345aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3M6_ACISJ
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TRAP dicarboxylate transporter subunit DctP
scnpilot_expt_750_bf_scaffold_1484_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22814..23506)
DNA (693bp) protein (231aa)
DctM-like transporter n=1 Tax=uncultured organism RepID=T1WAG2_9ZZZZ
TRAP dicarboxylate transporter subunit DctM Tax=GWA2_Burkholderiales_64_37_curated
C4-dicarboxylate ABC transporter
scnpilot_expt_750_bf_scaffold_1484_27
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23663..23899
DNA (237bp) protein (79aa)
Uncharacterised protein {ECO:0000313|EMBL:CRD98547.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
id=12551147 bin=BDI tax=BDI organism_group=Betaproteobacteria
scnpilot_expt_750_bf_scaffold_1484_28
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24048..24626)
DNA (579bp) protein (193aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCR5_ACIET
tripartite ATP-independent periplasmic transporter dctq component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACM32065.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
scnpilot_expt_750_bf_scaffold_1484_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24712..25731
DNA (1020bp) protein (340aa)
LysR family transcriptional regulator id=12551149 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1484_30
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25972..26172
DNA (201bp) protein (67aa)
Extracellular solute-binding protein family 3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5P9_ACIDE
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJA12025.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
extracellular solute-binding protein
Displaying 30 items

View Taxonomy