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scnpilot_expt_750_bf_scaffold_1000

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1000_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82..846)
DNA (765bp) protein (255aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhi
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U2B7_9RHIZ
phnC; phosphonate ABC transporter, ATP-binding protein
scnpilot_expt_750_bf_scaffold_1000_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(834..1286)
DNA (453bp) protein (151aa)
moaE; Molybdopterin converting factor subunit 2 (EC:2.8.1.12)
Molybdopterin synthase catalytic subunit n=2 Tax=Rhodobacter sphaeroides RepID=MOAE_RHOS4
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:KFL26733.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
scnpilot_expt_750_bf_scaffold_1000_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1297..1593)
DNA (297bp) protein (99aa)
Cytochrome C class I n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRD6_9RHIZ
Cytochrome C class I {ECO:0000313|EMBL:EHK56715.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi
hypothetical protein
scnpilot_expt_750_bf_scaffold_1000_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1603..2862)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003172C87
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:EIG62867.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
molybdenum cofactor synthesis domain-containing protein
scnpilot_expt_750_bf_scaffold_1000_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2908..5373)
DNA (2466bp) protein (822aa)
arsenate reductase (azurin) (EC:1.20.98.1)
Arsenite oxidase large subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0P8_9PROT
Arsenite oxidase large subunit {ECO:0000313|EMBL:EKE76334.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceani
scnpilot_expt_750_bf_scaffold_1000_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5385..5906)
DNA (522bp) protein (174aa)
arsenite oxidase small subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035CDD3B
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABE65010.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrob
scnpilot_expt_750_bf_scaffold_1000_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6031..7371)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000382B419
two component sigma54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS69172.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae
scnpilot_expt_750_bf_scaffold_1000_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7361..8809)
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
putative sensor histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036DBA1C
scnpilot_expt_750_bf_scaffold_1000_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8806..9636)
DNA (831bp) protein (277aa)
Phosphate/phosphonate ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I306_9RHIZ
Phosphate/phosphonate ABC transporter {ECO:0000313|EMBL:EHK52644.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
phosphate/phosphonate ABC transporter
scnpilot_expt_750_bf_scaffold_1000_10
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9792..10811
DNA (1020bp) protein (340aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Kaistia granuli RepID=UPI000363F504 rbh
moaA; radical SAM protein
scnpilot_expt_750_bf_scaffold_1000_11
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10804..11337
DNA (534bp) protein (178aa)
Molybdenum cofactor synthesis domain-containing protein n=2 Tax=Ochrobactrum intermedium RepID=C4WPM4_9RHIZ
Molybdenum cofactor biosynthesis protein MogA {ECO:0000313|EMBL:ELT49550.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Oc
Molybdopterin biosynthesis molybdochelatase MogA
scnpilot_expt_750_bf_scaffold_1000_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11317..12006)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBR8_XANP2
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS65461.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthoba
scnpilot_expt_750_bf_scaffold_1000_13
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12264..13301
DNA (1038bp) protein (346aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RPP5_9RHIZ rbh
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS {ECO:0000313|EMBL:ESR27254.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lut
phosphate ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_1000_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13361..14233
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000365574F
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:ESR27253.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="L
phosphate ABC transporter permease
scnpilot_expt_750_bf_scaffold_1000_15
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14233..14661
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000365574F
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:ESR27253.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="L
phosphate ABC transporter permease
scnpilot_expt_750_bf_scaffold_1000_16
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14669..15949
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036C7806 rbh
Phosphate transport system permease protein PstA {ECO:0000313|EMBL:ESR27252.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="L
phosphate ABC transporter permease
scnpilot_expt_750_bf_scaffold_1000_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16454..16699
DNA (246bp) protein (82aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate transport ATP-binding protein PstB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8R5_PELHB
phosphate transport ATP-binding protein PstB
scnpilot_expt_750_bf_scaffold_1000_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16718..17416
DNA (699bp) protein (233aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8R6_PELHB
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
phosphate transport system regulatory protein PhoU
scnpilot_expt_750_bf_scaffold_1000_19
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17428..18129
DNA (702bp) protein (234aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8R7_PELHB rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB13079.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
phosphate regulon transcriptional regulatory protein PhoB (SphR)
scnpilot_expt_750_bf_scaffold_1000_20
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18548..19078
DNA (531bp) protein (177aa)
Putative arsenate reductase arsC-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX80_POLGS
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:KFC70679.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sourc
arsenate reductase
scnpilot_expt_750_bf_scaffold_1000_21
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19078..19746
DNA (669bp) protein (223aa)
Major intrinsic protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAX6_9RHIZ
MIP family channel protein {ECO:0000313|EMBL:KKC33607.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;
transport transmembrane protein (aquaporin-like)
scnpilot_expt_750_bf_scaffold_1000_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19743..20174
DNA (432bp) protein (144aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
arsC; arsenate reductase (glutaredoxin) (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU46_9RHIZ
scnpilot_expt_750_bf_scaffold_1000_23
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20234..20563
DNA (330bp) protein (110aa)
UPI0003D05CBE related cluster n=2 Tax=unknown RepID=UPI0003D05CBE
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESW66453.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
ArsR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1000_24
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20616..22034
DNA (1419bp) protein (473aa)
Putative secreted protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IME9_XANP2
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ABS69192.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="
scnpilot_expt_750_bf_scaffold_1000_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22044..23255
DNA (1212bp) protein (404aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUS4_9RHIZ rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK55510.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_1000_26
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23597..24367
DNA (771bp) protein (257aa)
Integrase family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T837_ACIDE
Integrase family protein {ECO:0000313|EMBL:EHL20867.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;
phage integrase
scnpilot_expt_750_bf_scaffold_1000_27
unknown

Not on your lists

24533..24838
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1000_28
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24841..25188
DNA (348bp) protein (116aa)
UPI0003CE63D4 related cluster n=1 Tax=unknown RepID=UPI0003CE63D4
Uncharacterized protein {ECO:0000313|EMBL:ESX91268.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1000_29
unknown

Not on your lists

25755..25961
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1000_30
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26080..27087)
DNA (1008bp) protein (336aa)
Putative oxidoreductase n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z889_9RHOB rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAD57675.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnaba
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Displaying items 1-30 of 65 in total

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