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scnpilot_expt_750_bf_scaffold_1518

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1518_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..763)
DNA (762bp) protein (254aa)
Integron integrase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W882_9GAMM
Integron integrase {ECO:0000313|EMBL:EIL95673.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 11
putative integrase
scnpilot_expt_750_bf_scaffold_1518_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(989..1747)
DNA (759bp) protein (253aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219Z1_RHOPB
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABD86795.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source
scnpilot_expt_750_bf_scaffold_1518_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2109..2315
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000313E4C1
Uncharacterized protein {ECO:0000313|EMBL:EKS42781.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2378..3106
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJW0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28719.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3690..4058
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BIX9_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06159.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1518_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4340..4990
DNA (651bp) protein (217aa)
YjbE family integral membrane protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI32_AFIFE rbh
YjbE family integral membrane protein {ECO:0000313|EMBL:EKS28716.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
putative transmembrane protein
scnpilot_expt_750_bf_scaffold_1518_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5317..5886)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR87_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28713.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5883..6461)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDN4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28712.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6478..8721)
DNA (2244bp) protein (748aa)
Transpeptidase / transglycosylase {ECO:0000313|EMBL:EGP07762.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EGP07762.1};; EC=3.4.-.- {ECO:0000313|EMBL:EGP07762.1};; TaxID=709797 species="Bacteria; Proteobacteria;
Transpeptidase / transglycosylase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLA9_9BRAD
penicillin-binding protein
scnpilot_expt_750_bf_scaffold_1518_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9202..9717
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000361AF61 rbh
UPF0260 protein HMPREF9696_00332 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevel
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_11
unknown

Not on your lists

comp(9887..10051)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1518_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10291..10647
DNA (357bp) protein (119aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YP48_9BRAD
MFS transporter {ECO:0000313|EMBL:KJC62722.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM2
major facilitator superfamily transporter
scnpilot_expt_750_bf_scaffold_1518_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10614..11798
DNA (1185bp) protein (395aa)
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI0002DEE2CF
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:EKS42021.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
MFS transporter protein
scnpilot_expt_750_bf_scaffold_1518_14
unknown

Not on your lists

comp(11807..12004)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1518_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12267..12419
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5F3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08481.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12950..14254
DNA (1305bp) protein (435aa)
Phage DNA Packaging Protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JFS8_OLICO rbh
phage DNA Packaging Protein rbh
Putative terminase {ECO:0000313|EMBL:AEI06171.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovoran
scnpilot_expt_750_bf_scaffold_1518_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14401..14802
DNA (402bp) protein (134aa)
HK97 family phage portal protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH95_9BRAD
HK97 family phage portal protein {ECO:0000313|EMBL:EKS42032.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae A
phage portal protein
scnpilot_expt_750_bf_scaffold_1518_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14803..15573
DNA (771bp) protein (257aa)
portal protein n=1 Tax=Afipia birgiae RepID=UPI0002DEA371
phage portal protein, HK97 family
Phage portal protein {ECO:0000313|EMBL:AEI06173.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovor
scnpilot_expt_750_bf_scaffold_1518_19
unknown

Not on your lists

15639..15797
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1518_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15797..16000
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5F8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG08477.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16009..16191
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLC4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP07777.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16388..16903
DNA (516bp) protein (172aa)
Phage prohead protease, HK97 family n=2 Tax=Oligotropha carboxidovorans RepID=B6JFS3_OLICO rbh
phage prohead protease, HK97 family
Putative head maturation protease {ECO:0000313|EMBL:AEI06175.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha
scnpilot_expt_750_bf_scaffold_1518_23
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17251..17667
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JFS1_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCU72335.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-
scnpilot_expt_750_bf_scaffold_1518_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17660..18022
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BIZ6_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06176.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_1518_25
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18169..19434
DNA (1266bp) protein (422aa)
Phage major capsid protein, HK97 family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5G1_9BRAD
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EFI51558.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
phage major capsid protein, HK97 family
scnpilot_expt_750_bf_scaffold_1518_26
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19627..20505
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLC9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP07782.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20502..20873
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217R8_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ39692.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20927..21274
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037A9E2C
Uncharacterized protein {ECO:0000313|EMBL:KIZ39692.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_bf_scaffold_1518_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21517..22137
DNA (621bp) protein (207aa)
Acyltransferase 3 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM05_NITHX
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABE62742.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (s
scnpilot_expt_750_bf_scaffold_1518_30

Not on your lists

22134..22559
DNA (426bp) protein (142aa)
Acetyltransferase (Fragment) n=1 Tax=uncultured bacterium RepID=K2DIT5_9BACT
Acetyltransferase {ECO:0000313|EMBL:EKD97987.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
acyltransferase 3
Displaying items 1-30 of 44 in total

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