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scnpilot_expt_750_bf_scaffold_732

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_732_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159..1829)
DNA (1671bp) protein (557aa)
Aminotransferase, putative n=1 Tax=Sagittula stellata E-37 RepID=A3K8M8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB13305.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative aminotransferase
scnpilot_expt_750_bf_scaffold_732_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1914..2657)
DNA (744bp) protein (248aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E8768
Uncharacterized protein {ECO:0000313|EMBL:KFL28490.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative transcriptional regulator, GntR family
scnpilot_expt_750_bf_scaffold_732_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2804..4159
DNA (1356bp) protein (452aa)
Family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HLX3_9RHIZ
Glycosyl hydrolase {ECO:0000313|EMBL:KFL28489.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glycoside hydrolase family protein
scnpilot_expt_750_bf_scaffold_732_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4156..5100
DNA (945bp) protein (315aa)
PfkB domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UHR8_SINMW
Putative carbohydrate kinase {ECO:0000313|EMBL:CDP51347.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.
ribokinase-like domain-containing protein
scnpilot_expt_750_bf_scaffold_732_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5117..6355
DNA (1239bp) protein (413aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A816_DEIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC37426.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
sugar ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_732_6
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6444..7328
DNA (885bp) protein (295aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A649_DEIPD
Uncharacterized protein {ECO:0000313|EMBL:KKC37425.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
TIM-barrel fold metal-dependent hydrolase
scnpilot_expt_750_bf_scaffold_732_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7401..8306
DNA (906bp) protein (302aa)
Permease component of ABC-type sugar transporter n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A8C1_DEIPD
N-Acetyl-D-glucosamine ABC transport system, perme ase protein 1 {ECO:0000313|EMBL:CDP51350.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; De
sugar ABC transporter permease
scnpilot_expt_750_bf_scaffold_732_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8299..9138
DNA (840bp) protein (280aa)
ABC-type sugar transport system, permease component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A798_DEIPD rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL28485.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-
sugar ABC transporter permease rbh
scnpilot_expt_750_bf_scaffold_732_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9142..10341)
DNA (1200bp) protein (400aa)
UPI0003CF8A6C related cluster n=1 Tax=unknown RepID=UPI0003CF8A6C
Transcriptional regulator FrcR for fructose utiliz ation, ROK family {ECO:0000313|EMBL:CDP52324.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae
ROK family protein
scnpilot_expt_750_bf_scaffold_732_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10482..11132
DNA (651bp) protein (217aa)
Hydrolase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HMI3_9RHIZ
Arylesterase {ECO:0000313|EMBL:CDP52325.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
lipolytic protein
scnpilot_expt_750_bf_scaffold_732_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11262..12422
DNA (1161bp) protein (387aa)
UPI0003D04868 related cluster n=1 Tax=unknown RepID=UPI0003D04868 rbh
Ribose ABC transport system, periplasmic ribose-b inding protein RbsB {ECO:0000313|EMBL:CDP52326.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiacea
ribose ABC transporter
scnpilot_expt_750_bf_scaffold_732_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12491..14338
DNA (1848bp) protein (616aa)
UPI0003CF4C41 related cluster n=1 Tax=unknown RepID=UPI0003CF4C41 rbh
D-xylose transport ATP-binding protein XylG {ECO:0000313|EMBL:CDP52327.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devo
ABC transporter
scnpilot_expt_750_bf_scaffold_732_13
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14414..14695)
DNA (282bp) protein (94aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ54_9RHOB
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EAR52746.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocean
hypothetical protein
scnpilot_expt_750_bf_scaffold_732_14
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14730..15074)
DNA (345bp) protein (115aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJ54_9RHOB
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EAR52746.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Ocean
RraA-like protein
scnpilot_expt_750_bf_scaffold_732_15
bacterium YEK0313, Bacteria

Not on your lists

15399..16217
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036BADA4
Transcriptional regulator KdgR {ECO:0000313|EMBL:CEJ10536.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator, IclR family
scnpilot_expt_750_bf_scaffold_732_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16460..17968
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M973_9RHIZ
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bos
hypothetical protein
scnpilot_expt_750_bf_scaffold_732_17
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18000..19010
DNA (1011bp) protein (337aa)
pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family (EC:3.5.99.7)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3ARK3_9CAUL
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:GAD60324.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" sou
scnpilot_expt_750_bf_scaffold_732_18
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19016..20239
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FH00_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67872.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
selenocysteine synthase (seryl-tRNASer selenium transferase)
scnpilot_expt_750_bf_scaffold_732_19
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

20236..21165
DNA (930bp) protein (310aa)
Putative sugar uptake ABC transporter permease protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0H9_THERP
sugar ABC transporter permease
Putative sugar uptake ABC transporter permease protein {ECO:0000313|EMBL:ACM05368.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="The
scnpilot_expt_750_bf_scaffold_732_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

21167..22012
DNA (846bp) protein (282aa)
Inner membrane ABC transporter permease protein ycjP n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0I0_THERP
inner membrane ABC transporter permease YcjP
Inner membrane ABC transporter permease protein ycjP {ECO:0000313|EMBL:ACM05285.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Therm
scnpilot_expt_750_bf_scaffold_732_21
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22050..23378
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362CCCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY44928.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytic
scnpilot_expt_750_bf_scaffold_732_22
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23457..24353)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036853DF
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:EIM74065.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;"
succinylglutamate desuccinylase/aspartoacylase
scnpilot_expt_750_bf_scaffold_732_23
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24385..25545)
DNA (1161bp) protein (387aa)
Amidohydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3F1_AZOC5
dihydroorotase
Amidohydrolase {ECO:0000313|EMBL:BAF88014.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (str
scnpilot_expt_750_bf_scaffold_732_24
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25563..26486)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QKA4_BORBO rbh
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KDD62947.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
hypothetical protein
scnpilot_expt_750_bf_scaffold_732_25
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26543..27325
DNA (783bp) protein (261aa)
GntR domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UER2_SINMW
Uncharacterized protein {ECO:0000313|EMBL:KJV10529.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
GntR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_732_26
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27326..27787)
DNA (462bp) protein (154aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Burkholderia sp. BT03 RepID=J3C6L5_9BURK
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AJY48440.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica
scnpilot_expt_750_bf_scaffold_732_27
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(27811..28929)
DNA (1119bp) protein (373aa)
Mandelate racemase/muconate lactonizing protein id=3932181 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ABU59892.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;"
scnpilot_expt_750_bf_scaffold_732_28
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29088..30422
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI00035C5141 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM35144.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source
extracellular solute-binding protein
scnpilot_expt_750_bf_scaffold_732_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30419..31309
DNA (891bp) protein (297aa)
Putative ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XD70_VARPD
putative ABC transporter, permease protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
putative ABC transporter, permease protein
scnpilot_expt_750_bf_scaffold_732_30
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31306..32166
DNA (861bp) protein (287aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CU88_VARPS
ABC transporter permease {ECO:0000313|EMBL:KJB96503.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
binding-protein-dependent transport systems inner membrane component
Displaying items 1-30 of 31 in total

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