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scnpilot_expt_750_bf_scaffold_772

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_772_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95..463)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP50332.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_expt_750_bf_scaffold_772_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

718..1323
DNA (606bp) protein (202aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037F6CE0
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KKB84287.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia
cAMP-binding protein
scnpilot_expt_750_bf_scaffold_772_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1431..1664)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP50329.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_expt_750_bf_scaffold_772_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1741..2181)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JN88_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDP50327.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_772_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2183..2581)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Bartonella tamiae RepID=J1K3K9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB80245.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
DNA gyrase subunit B
scnpilot_expt_750_bf_scaffold_772_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2723..2878)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9D6_PHEZH
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_expt_750_bf_scaffold_772_7
unknown

Not on your lists

comp(2895..3062)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_772_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3204..4082)
DNA (879bp) protein (293aa)
transglutaminase n=1 Tax=Rhizobium loti RepID=UPI00035CD969 rbh
Transglutaminase {ECO:0000313|EMBL:KKB11900.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
protein containing transglutaminase-like domain cysteine protease
scnpilot_expt_750_bf_scaffold_772_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4088..6496)
DNA (2409bp) protein (803aa)
UPI0003CDDDB1 related cluster n=1 Tax=unknown RepID=UPI0003CDDDB1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB11899.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_772_10
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6567..6893)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Pseudomonas syringae group RepID=Q48B48_PSE14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGH05150.1}; TaxID=629258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" sour
scnpilot_expt_750_bf_scaffold_772_11
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6890..7153)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RRJ4_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI74787.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter
scnpilot_expt_750_bf_scaffold_772_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7200..10526)
DNA (3327bp) protein (1109aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BK54_9RHIZ rbh
IMP dehydrogenase {ECO:0000313|EMBL:KKB11898.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative transglutaminase domain protein
scnpilot_expt_750_bf_scaffold_772_13
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10637..11458
DNA (822bp) protein (274aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI0002FBCCC6
LysR family transcriptional regulator {ECO:0000313|EMBL:KJE36607.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source=
transcriptional regulator
scnpilot_expt_750_bf_scaffold_772_14
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11587..12744
DNA (1158bp) protein (386aa)
Extracellular solute-binding protein family 1 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FB37_9RHIZ
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHS49949.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobi
putative ABC transporter periplasmic binding protein
scnpilot_expt_750_bf_scaffold_772_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12891..13835
DNA (945bp) protein (315aa)
UPI0003CE2101 related cluster n=1 Tax=unknown RepID=UPI0003CE2101
Putative spermidine/putrescine transporter subunit ATP-binding component of ABC superfamily tranporter {ECO:0000313|EMBL:CDX14374.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacter
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_772_16
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13832..14785
DNA (954bp) protein (318aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3M9_9RHIZ rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KGF68265.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="
binding-protein-dependent transport system inner membrane protein
scnpilot_expt_750_bf_scaffold_772_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14775..15590
DNA (816bp) protein (272aa)
ABC transporter integral membrane protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3N0_9RHIZ
ABC transporter integral membrane protein {ECO:0000313|EMBL:EHK52407.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
binding-protein-dependent transport system inner membrane protein
scnpilot_expt_750_bf_scaffold_772_18
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15613..17040
DNA (1428bp) protein (476aa)
Betaine-aldehyde dehydrogenase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JAH8_AGRRK rbh
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:GAJ94233.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
gamma-aminobutyraldehyde dehydrogenase
scnpilot_expt_750_bf_scaffold_772_19
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17086..18564)
DNA (1479bp) protein (493aa)
Multiple polyol-specific dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDX1_PELHB
Mannitol dehydrogenase {ECO:0000313|EMBL:KKC36562.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudin
multiple polyol-specific dehydrogenase
scnpilot_expt_750_bf_scaffold_772_20
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18663..19397)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031A5C28
Uncharacterized protein {ECO:0000313|EMBL:KKB80489.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
GntR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_772_21
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(19568..20095)
DNA (528bp) protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR89490.1}; TaxID=1397361 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomatace
scnpilot_expt_750_bf_scaffold_772_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20222..21058)
DNA (837bp) protein (279aa)
sseA; 3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
3-mercaptopyruvate sulfurtransferase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CD74_9RHOB rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
scnpilot_expt_750_bf_scaffold_772_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21068..22375)
DNA (1308bp) protein (436aa)
Sulfatase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8E5_MESCW rbh
sulfatase
Sulfatase {ECO:0000313|EMBL:ADV10601.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserru
scnpilot_expt_750_bf_scaffold_772_24
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22578..23645)
DNA (1068bp) protein (356aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomic
ABC transporter, ATP-binding protein (Sulfate) n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H21_RHILO
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_772_25
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23648..24436)
DNA (789bp) protein (263aa)
UPI0003D023E4 related cluster n=1 Tax=unknown RepID=UPI0003D023E4
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KKB08419.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
binding-protein-dependent transport system inner membrane protein
scnpilot_expt_750_bf_scaffold_772_26
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24433..25437)
DNA (1005bp) protein (335aa)
acriflavin resistance protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037B9F42
ABC transporter permease protein {ECO:0000313|EMBL:CDP50316.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB
cysT1; putative sulfate transport system permease protein cysT
scnpilot_expt_750_bf_scaffold_772_27
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25376..26485)
DNA (1110bp) protein (370aa)
Iron ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLZ4_9RHIZ rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB80232.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
iron ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_772_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26927..28171
DNA (1245bp) protein (415aa)
Possible iron-regulated protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKF4_MOBAS rbh
Peptidase {ECO:0000313|EMBL:KFL31650.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative iron-regulated protein
scnpilot_expt_750_bf_scaffold_772_29
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28262..29773
DNA (1512bp) protein (504aa)
Possible thiol oxidoreductase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKF5_MOBAS rbh
Thiol oxidoreductase {ECO:0000313|EMBL:KKC36576.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis
thiol oxidoreductase
scnpilot_expt_750_bf_scaffold_772_30
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29774..30850
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036AD657
Peptidase M75, Imelysin {ECO:0000313|EMBL:KFC62560.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
peptidase M75, Imelysin
Displaying items 1-30 of 102 in total

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