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scnpilot_expt_750_bf_scaffold_910

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_910_1
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1116)
DNA (1116bp) protein (372aa)
ABC transporter-like protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LA71_9RHIZ
ABC transporter-like protein {ECO:0000313|EMBL:EIZ81419.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylob
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_910_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1140..2384)
DNA (1245bp) protein (415aa)
amidohydrolase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035F4C3F
Uncharacterized protein {ECO:0000313|EMBL:KFL28839.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
amidohydrolase
scnpilot_expt_750_bf_scaffold_910_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2395..3339)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036FB026
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter integral membrane protein
scnpilot_expt_750_bf_scaffold_910_4
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3355..4923)
DNA (1569bp) protein (523aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQ87_9CLOT rbh
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CCX41366.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmen
peptide ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_910_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4976..6187)
DNA (1212bp) protein (404aa)
Threonine synthase n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TEV8_THEC1
Uncharacterized protein {ECO:0000313|EMBL:KFL28838.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
threonine synthase
scnpilot_expt_750_bf_scaffold_910_6
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6237..7073)
DNA (837bp) protein (279aa)
ABC-type dipeptide/oligopeptide/nickel transport system permease component n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AF55_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:CCX41368.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
peptide/nickel transport system permease protein
scnpilot_expt_750_bf_scaffold_910_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7247..8029
DNA (783bp) protein (261aa)
IclR family regulatory protein n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RGU2_ERWST
Uncharacterized protein {ECO:0000313|EMBL:KGM31530.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
IclR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_910_trna_1
unknown

Not on your lists

8082..8152
DNA (71bp)
transferRNA
scnpilot_expt_750_bf_scaffold_910_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8172..8504)
DNA (333bp) protein (111aa)
Degradation protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EW3_RHILO
degradation protein
Degradation protein {ECO:0000313|EMBL:BAB50804.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain
scnpilot_expt_750_bf_scaffold_910_9
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8508..9269)
DNA (762bp) protein (254aa)
UPI0003CF3EBE related cluster n=1 Tax=unknown RepID=UPI0003CF3EBE
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KKB81746.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;
2-deoxy-D-gluconate 3-dehydrogenase
scnpilot_expt_750_bf_scaffold_910_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9462..10469)
DNA (1008bp) protein (336aa)
Malate/L-lactate family dehydrogenase n=1 Tax=Pseudomonas syringae pv. aesculi str. 0893_23 RepID=F3DDI9_9PSED rbh
lactate dehydrogenase
Lactate dehydrogenase {ECO:0000313|EMBL:AIB16491.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasile
scnpilot_expt_750_bf_scaffold_910_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10466..11440)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003678C33
Uncharacterized protein {ECO:0000313|EMBL:KDP72816.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
proline racemase
scnpilot_expt_750_bf_scaffold_910_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11437..12567)
DNA (1131bp) protein (377aa)
muconate-lactonizing protein n=1 Tax=Xanthobacteraceae RepID=UPI000370FE1C rbh
Mandelate racemase {ECO:0000313|EMBL:KKB80626.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
mandelate racemase/muconate lactonizing protein
scnpilot_expt_750_bf_scaffold_910_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..13650)
DNA (1002bp) protein (334aa)
4-hydroxyproline epimerase {ECO:0000313|EMBL:CCV04751.1}; EC=5.1.1.8 {ECO:0000313|EMBL:CCV04751.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriace
hydroxyproline-2-epimerase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBA969
proline racemase
scnpilot_expt_750_bf_scaffold_910_14
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13658..14908)
DNA (1251bp) protein (417aa)
D-amino acid dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI00036D25B5 rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADH87494.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (s
scnpilot_expt_750_bf_scaffold_910_15
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14911..15819)
DNA (909bp) protein (303aa)
Dihydrodipicolinate synthetase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LNC5_9PROT rbh
dihydrodipicolinate synthetase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KEO58130.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalasso
scnpilot_expt_750_bf_scaffold_910_16
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15857..16576)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T504_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY91232.1}; TaxID=1335757 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter sp
scnpilot_expt_750_bf_scaffold_910_17
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16566..17345)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000379EB32
ABC transporter {ECO:0000313|EMBL:KFF49881.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_910_18
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17342..18313)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003764B08
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFF49882.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;
hypothetical protein
scnpilot_expt_750_bf_scaffold_910_19
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18313..19251)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T134_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:KFF49883.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_910_20
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19326..20438)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035DA03E rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFF49884.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_910_21
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20555..21277
DNA (723bp) protein (241aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F72_MESSB
AsnC family transcriptional regulator {ECO:0000313|EMBL:KFL25853.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp
GntR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_910_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21314..22111)
DNA (798bp) protein (266aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Burkholderia sp. BT03 RepID=J3BUR5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFL32187.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
AraC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_910_23
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22181..23869)
DNA (1689bp) protein (563aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AD02_RHIRD rbh
Sorbosone dehydrogenase {ECO:0000313|EMBL:KFL27086.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
sorbosone dehydrogenase
scnpilot_expt_750_bf_scaffold_910_24
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24016..25314
DNA (1299bp) protein (433aa)
Succinate-semialdehyde dehydrogenase [NADP+] {ECO:0000313|EMBL:CDP51168.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDP51168.1};; EC=1.2.1.24 {ECO:0000313|EMBL:CDP51168.1};; TaxID=1228055 species="Bacteria; Pro
Aldehyde dehydrogenase family protein n=2 Tax=Burkholderia cenocepacia RepID=B4EDR4_BURCJ
aldehyde dehydrogenase family protein
scnpilot_expt_750_bf_scaffold_910_25
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25337..26152
DNA (816bp) protein (272aa)
Putative Nucleoside-diphosphate-sugar epimerase n=10 Tax=Vibrio nigripulchritudo RepID=U4KBR8_9VIBR
putative Nucleoside-diphosphate-sugar epimerase
Putative Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CCN40742.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio
scnpilot_expt_750_bf_scaffold_910_26
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26258..27514
DNA (1257bp) protein (419aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rho
D-amino acid dehydrogenase small subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC21_9BRAD
dadA; D-amino acid dehydrogenase small subunit
scnpilot_expt_750_bf_scaffold_910_27
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27495..28910)
DNA (1416bp) protein (472aa)
Putative glycosyl transferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9I8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP51235.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative glycosyl transferase
scnpilot_expt_750_bf_scaffold_910_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29451..30260
DNA (810bp) protein (270aa)
Arginine-binding periplasmic protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9I9_PELHB rbh
Bacterial extracellular solute-binding protein, fa mily 3 {ECO:0000313|EMBL:CDP51236.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;
arginine-binding periplasmic protein rbh
scnpilot_expt_750_bf_scaffold_910_29
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30263..30676)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VUC5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL31037.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
tellurite resistance TerB-like protein
Displaying items 1-30 of 49 in total

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