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scnpilot_expt_750_bf_scaffold_965

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_965_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..785)
DNA (783bp) protein (261aa)
peptidase n=1 Tax=Afipia birgiae RepID=UPI0003800637
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EKS37321.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
PTSINtr with GAF domain, PtsP
scnpilot_expt_750_bf_scaffold_965_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1081..1614)
DNA (534bp) protein (178aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F8_9BRAD
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
antibiotic resistance protein
scnpilot_expt_750_bf_scaffold_965_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1774..3012)
DNA (1239bp) protein (413aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
aspartate kinase (EC:2.7.2.4) rbh
Aspartokinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F7_9BRAD rbh
scnpilot_expt_750_bf_scaffold_965_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3219..3683
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NYY7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33684.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_965_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3696..4448
DNA (753bp) protein (251aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG31_9BRAD
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
scnpilot_expt_750_bf_scaffold_965_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4671..5570
DNA (900bp) protein (300aa)
DMT transporter permease n=1 Tax=Afipia birgiae RepID=UPI00031CA7C3
Uncharacterized protein {ECO:0000313|EMBL:EKS37317.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_965_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5571..6017)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P765_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37316.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_965_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6054..6536)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53183.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_965_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6533..7417)
DNA (885bp) protein (295aa)
hydrolase Sll0601 (EC:3.5.-.-)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQD1_AFIFE rbh
N-carbamoyl-D-amino acid hydrolase {ECO:0000313|EMBL:CEG10361.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
scnpilot_expt_750_bf_scaffold_965_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7420..7689)
DNA (270bp) protein (90aa)
Glutaredoxin 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0F1_9BRAD
Glutaredoxin 3 {ECO:0000313|EMBL:EFI53181.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
grxC; glutaredoxin 3
scnpilot_expt_750_bf_scaffold_965_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7719..8435)
DNA (717bp) protein (239aa)
amidophosphoribosyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003796F74
ComF family protein {ECO:0000313|EMBL:EKS37310.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
competence protein ComF
scnpilot_expt_750_bf_scaffold_965_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8658..9542
DNA (885bp) protein (295aa)
Methyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=B6JAC8_OLICO
methyltransferase
Methyltransferase {ECO:0000313|EMBL:AEI05148.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans
scnpilot_expt_750_bf_scaffold_965_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9644..10045)
DNA (402bp) protein (134aa)
Mutator MutT protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E8_9BRAD
Mutator MutT protein {ECO:0000313|EMBL:EFI53178.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
NTP pyrophosphohydrolase
scnpilot_expt_750_bf_scaffold_965_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10059..10556)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QBK2_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE26037.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
scnpilot_expt_750_bf_scaffold_965_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10553..11788)
DNA (1236bp) protein (412aa)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P440_9BRAD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase
scnpilot_expt_750_bf_scaffold_965_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12062..12964)
DNA (903bp) protein (301aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E6_9BRAD rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
scnpilot_expt_750_bf_scaffold_965_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13348..15021
DNA (1674bp) protein (558aa)
Protein translocase subunit SecA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E5_9BRAD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
secA; preprotein translocase subunit SecA
Displaying 17 items

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