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scnpilot_expt_750_bf_scaffold_3769

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3769_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..357
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378C2D0
Esterase/lipase {ECO:0000313|EMBL:CDP52212.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
lipase
scnpilot_expt_750_bf_scaffold_3769_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529..1596
DNA (1068bp) protein (356aa)
Chaperone protein DnaJ n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWK3_9RHIZ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhiz
chaperone protein DnaJ
scnpilot_expt_750_bf_scaffold_3769_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1622..2221
DNA (600bp) protein (200aa)
Phosphoglycerate mutase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B3C5_RHILS
Uncharacterized protein {ECO:0000313|EMBL:KKB13611.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
phosphoglycerate mutase
scnpilot_expt_750_bf_scaffold_3769_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2262..2618
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000376843B
Uncharacterized protein {ECO:0000313|EMBL:CDP52234.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_expt_750_bf_scaffold_3769_5
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2615..3172
DNA (558bp) protein (186aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7S5_PELHB
imidazole glycerol phosphate synthase amidotransferase subunit
scnpilot_expt_750_bf_scaffold_3769_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3169..3906
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=234 Tax=Brucella RepID=HIS4_BRUA1 rbh
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
scnpilot_expt_750_bf_scaffold_3769_7
unknown

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3903..4415
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3769_8
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4412..5512)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DHD1_9RHIZ rbh
Restriction endonuclease or methylase {ECO:0000313|EMBL:KKC37974.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ep
hypothetical protein
scnpilot_expt_750_bf_scaffold_3769_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5663..5923
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000362DA20
Uncharacterized protein {ECO:0000313|EMBL:AHE57271.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_expt_750_bf_scaffold_3769_10
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5988..6281)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:AEF81735.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888
scnpilot_expt_750_bf_scaffold_3769_11
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6641..7738
DNA (1098bp) protein (366aa)
Dihydrofolate synthase / folylpolyglutamate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9E9_PELHB
Folylpolyglutamate synthase {ECO:0000313|EMBL:KKC31498.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.
dihydrofolate synthase/folylpolyglutamate synthase
scnpilot_expt_750_bf_scaffold_3769_12
unknown

Not on your lists

7771..7950
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3769_13
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7947..8657)
DNA (711bp) protein (237aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
Orotidine 5'-phosphate decarboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7T8_PELHB
orotidine 5'-phosphate decarboxylase
scnpilot_expt_750_bf_scaffold_3769_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8800..9255
DNA (456bp) protein (152aa)
UPI0003D609E9 related cluster n=1 Tax=unknown RepID=UPI0003D609E9
Uncharacterized protein {ECO:0000313|EMBL:CDP52224.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_3769_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9579..10253
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA18_PELHB
Haloacid dehalogenase {ECO:0000313|EMBL:KKB86740.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
HAD superfamily hydrolase
scnpilot_expt_750_bf_scaffold_3769_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10551..11330
DNA (780bp) protein (260aa)
Putative signal peptide protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA16_PELHB
Cell wall hydrolyse {ECO:0000313|EMBL:CDP53295.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative signal peptide protein
Displaying 16 items

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