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scnpilot_expt_750_bf_scaffold_2152

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2152_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..444)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P442_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33198.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

461..1171
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5J1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34940.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_3
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1206..1535)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NS57_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP08992.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1717..2718)
DNA (1002bp) protein (334aa)
Fructokinase {ECO:0000313|EMBL:EGP08991.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EGP08991.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Br
Fructokinase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIA0_9BRAD rbh
pfkB domain protein
scnpilot_expt_750_bf_scaffold_2152_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2865..4454
DNA (1590bp) protein (530aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002DD1A4E
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae
virulence factor MviN-like protein
scnpilot_expt_750_bf_scaffold_2152_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4587..5624
DNA (1038bp) protein (346aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXJ3_9BRAD rbh
scnpilot_expt_750_bf_scaffold_2152_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5715..6209
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5I6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34935.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6367..6933
DNA (567bp) protein (189aa)
iron transporter n=1 Tax=Afipia birgiae RepID=UPI0002D6F3CC rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34934.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
nfu; NFU iron-sulfur cluster scaffold-like protein
scnpilot_expt_750_bf_scaffold_2152_9
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7114..7806
DNA (693bp) protein (231aa)
Putative molecular chaperone n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI95_9BRAD rbh
Putative molecular chaperone {ECO:0000313|EMBL:EGP08986.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium S
peptidase M22 glycoprotease
scnpilot_expt_750_bf_scaffold_2152_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7808..8188
DNA (381bp) protein (127aa)
alanine acetyltransferase n=1 Tax=Afipia birgiae RepID=UPI00030DD705
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EKS34932.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
ribosomal-protein-alanine acetyltransferase
scnpilot_expt_750_bf_scaffold_2152_11
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8267..8731
DNA (465bp) protein (155aa)
Manganese uptake regulation protein Mur n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI93_9BRAD rbh
Manganese uptake regulation protein Mur {ECO:0000313|EMBL:EGP08984.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae
ferric uptake regulator family protein
scnpilot_expt_750_bf_scaffold_2152_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8728..9414
DNA (687bp) protein (229aa)
HAD hydrolase, family IA n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5I2_9BRAD rbh
HAD hydrolase, family IA {ECO:0000313|EMBL:EKS34930.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 4971
HAD family hydrolase
scnpilot_expt_750_bf_scaffold_2152_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9503..10957
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2I2_9BRAD rbh
(dimethylallyl)adenosine tRNA methylthiotransferase
scnpilot_expt_750_bf_scaffold_2152_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10962..12017
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P992_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34928.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
PhoH family protein
scnpilot_expt_750_bf_scaffold_2152_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12138..12479
DNA (342bp) protein (114aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=883079 species="Bacteria; Pr
Endoribonuclease YbeY n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI89_9BRAD
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12479..13588
DNA (1110bp) protein (370aa)
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI00030AA0FF rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33184.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
transporter
scnpilot_expt_750_bf_scaffold_2152_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13585..15201
DNA (1617bp) protein (539aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=883078 species=
apolipoprotein N-acyltransferase n=1 Tax=Afipia birgiae RepID=UPI000308A540 rbh
lnt; apolipoprotein N-acyltransferase
scnpilot_expt_750_bf_scaffold_2152_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15398..15814
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P988_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34923.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
XRE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2152_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15935..16660
DNA (726bp) protein (242aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NX56_9BRAD rbh
scnpilot_expt_750_bf_scaffold_2152_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16697..17731)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003049643 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34921.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_21
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18167..18880
DNA (714bp) protein (238aa)
Ribosome maturation factor RimP n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXH6_9BRAD
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; A
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_22
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18884..20488
DNA (1605bp) protein (535aa)
Transcription termination protein NusA n=2 Tax=Bradyrhizobiaceae RepID=F7QI81_9BRAD rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source=
nusA; transcription elongation factor NusA rbh
scnpilot_expt_750_bf_scaffold_2152_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20549..21244
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P984_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34918.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_2152_24
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21299..23893
DNA (2595bp) protein (865aa)
Translation initiation factor IF-2 n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI79_9BRAD rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
infB; translation initiation factor IF-2
scnpilot_expt_750_bf_scaffold_2152_25
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24083..24505
DNA (423bp) protein (141aa)
ribosome-binding factor A n=1 Tax=Afipia birgiae RepID=UPI00030229DD
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
rbfA; ribosome-binding factor A
scnpilot_expt_750_bf_scaffold_2152_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24505..25356
DNA (852bp) protein (284aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5G8_9BRAD
Displaying 26 items

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