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scnpilot_expt_750_bf_scaffold_2165

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2165_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..333
DNA (333bp) protein (111aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002EC3859
Uncharacterized protein {ECO:0000313|EMBL:EKS36199.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
livG4; branched-chain amino acid ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_2165_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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330..1064
DNA (735bp) protein (245aa)
amino acid ABC transporter ATPase n=1 Tax=Afipia birgiae RepID=UPI0002E8B6A8 rbh
Branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:EGP06930.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Br
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_2165_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1132..1494
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3Z4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36201.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_2165_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1607..2722
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0S2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36202.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
extracellular ligand-binding receptor
scnpilot_expt_750_bf_scaffold_2165_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2844..3488)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PA22_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37634.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
cytochrome c biogenesis protein, transmembrane region
scnpilot_expt_750_bf_scaffold_2165_6
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3559..3855
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXB0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD98837.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_2165_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3852..4526
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P653_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36204.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
peptidase S58, DmpA
scnpilot_expt_750_bf_scaffold_2165_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4554..5300)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QPG6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP06937.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
hypothetical protein
scnpilot_expt_750_bf_scaffold_2165_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5591..6292
DNA (702bp) protein (234aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Afipia birgiae RepID=UPI0003733E9F rbh
scnpilot_expt_750_bf_scaffold_2165_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6329..7666
DNA (1338bp) protein (446aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P659_9BRAD rbh
scnpilot_expt_750_bf_scaffold_2165_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7671..8210
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9E1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36210.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_2165_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8220..8771)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ79_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27630.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cytochrome B561
scnpilot_expt_750_bf_scaffold_2165_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8876..9676
DNA (801bp) protein (267aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=883079 species="Bacteria; Prote
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4Z5_9BRAD rbh
scnpilot_expt_750_bf_scaffold_2165_14
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9759..10160
DNA (402bp) protein (134aa)
cupin n=1 Tax=Afipia birgiae RepID=UPI0002EA4AF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL75756.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
scnpilot_expt_750_bf_scaffold_2165_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10355..10774
DNA (420bp) protein (140aa)
30S ribosomal protein S4 n=1 Tax=Afipia birgiae RepID=UPI00037EE4FE
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC
rpsD; 30S ribosomal protein S4
Displaying 15 items

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