ggKbase home page

scnpilot_expt_750_bf_scaffold_2255

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2255_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

3..425
DNA (423bp) protein (141aa)
X-Pro dipeptidyl-peptidase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5R9_SPHTD
X-Pro dipeptidyl-peptidase domain-containing protein
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ACZ39471.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Spha
scnpilot_expt_750_bf_scaffold_2255_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

451..1935
DNA (1485bp) protein (495aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKM7_9RHIZ
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIM24519.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloba
ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_2255_3
unknown

Not on your lists

comp(2039..2815)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B3A44
Uncharacterized protein {ECO:0000313|EMBL:CPR18659.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
scnpilot_expt_750_bf_scaffold_2255_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2921..3583
DNA (663bp) protein (221aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000255|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000255|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000255|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=MSRA_METNO
scnpilot_expt_750_bf_scaffold_2255_5
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3600..4427)
DNA (828bp) protein (276aa)
Alpha/beta superfamily hydrolase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TTJ5_9DELT
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:ERK85673.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" sourc
alpha/beta superfamily hydrolase
scnpilot_expt_750_bf_scaffold_2255_6
unknown

Not on your lists

comp(4523..5029)
DNA (507bp) protein (169aa)
TIGR01244 family protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR21896.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_2255_7
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5236..5700
DNA (465bp) protein (155aa)
ArsR family transcriptional regulator n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037BE59A
AsnC/Lrp family transcriptional regulator
Putative transcriptional regulator, AsnC/Lrp family {ECO:0000313|EMBL:CCB65537.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;
scnpilot_expt_750_bf_scaffold_2255_trna_1
unknown

Not on your lists

5974..6055
DNA (82bp)
transferRNA
scnpilot_expt_750_bf_scaffold_2255_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6229..6897
DNA (669bp) protein (223aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037FCD44
trigger factor
scnpilot_expt_750_bf_scaffold_2255_9
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6852..7262
DNA (411bp) protein (137aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZM7_9RHIZ
Displaying 10 items

View Taxonomy