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scnpilot_expt_750_bf_scaffold_2376

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2376_1
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1263)
DNA (1263bp) protein (421aa)
Galactarate dehydratase {ECO:0000313|EMBL:ACA20855.1}; EC=4.2.1.42 {ECO:0000313|EMBL:ACA20855.1};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae
Galactarate dehydratase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UD34_METS4
galactarate dehydratase
scnpilot_expt_750_bf_scaffold_2376_2
unknown

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1560..1799
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2376_3
unknown

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comp(1892..2143)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2376_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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2375..3625
DNA (1251bp) protein (417aa)
Phenylacetate-CoA ligase putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWG8_POLGS rbh
Phenylacetate-CoA ligase
Phenylacetate-CoA ligase putative {ECO:0000313|EMBL:ADZ69267.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMC
scnpilot_expt_750_bf_scaffold_2376_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3685..3987)
DNA (303bp) protein (101aa)
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX23_AZOBR
ABC transporter permease
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein {ECO:0000313|EMBL:CCD02432.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacter
scnpilot_expt_750_bf_scaffold_2376_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3944..4840)
DNA (897bp) protein (299aa)
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX23_AZOBR
putative ABC transporter, substrate binding protein; possible branched chain amino acid binding protein
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein {ECO:0000313|EMBL:CCD02432.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacter
scnpilot_expt_750_bf_scaffold_2376_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4968..5450)
DNA (483bp) protein (161aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRA8_HALO1
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY17136.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" sou
scnpilot_expt_750_bf_scaffold_2376_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5644..6177)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037DDA9E
acetoacetyl-CoA reductase
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AHB47604.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium
scnpilot_expt_750_bf_scaffold_2376_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6401..7588)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AHB47605.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AHB47605.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiac
acetyl-CoA acetyltransferase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035F6397 rbh
scnpilot_expt_750_bf_scaffold_2376_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7830..8510
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000379E084
phaR; regulator for granule-associated proteins, PHB biosynthesis and acetyl-CoA flux
Putative regulator for granule-associated proteins, PHB biosynthesis and acetyl-CoA flux {ECO:0000313|EMBL:CCB67290.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
scnpilot_expt_750_bf_scaffold_2376_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8630..9016
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SVU9_NITWN
Uncharacterized protein {ECO:0000313|EMBL:ETR77633.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2376_12
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9047..9295
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0G2_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE43710.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia a
hypothetical protein
scnpilot_expt_750_bf_scaffold_2376_13
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9292..9522
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C5BDE
arylsulfate sulfotransferase
Arylsulfate sulfotransferase {ECO:0000313|EMBL:AHB49513.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobi
scnpilot_expt_750_bf_scaffold_2376_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9799..10323
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003604FE4
Uncharacterized protein {ECO:0000313|EMBL:KFC74448.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_2376_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10544..11731
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HEK4_9BRAD rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJB94564.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skerma
hypothetical protein
scnpilot_expt_750_bf_scaffold_2376_16
unknown

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11962..12702
DNA (741bp) protein (247aa)

This feature has no annotations

Displaying 16 items

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