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scnpilot_expt_750_bf_scaffold_2883

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2883_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..523)
DNA (522bp) protein (174aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PE66_9BRAD
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS39836.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_2883_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(693..863)
DNA (171bp) protein (57aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJZ4_9BRAD
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS39835.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
multidrug resistance protein MdtB
scnpilot_expt_750_bf_scaffold_2883_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(803..3745)
DNA (2943bp) protein (981aa)
acriflavine resistance protein B n=1 Tax=Afipia birgiae RepID=UPI0002D7ACAC
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKS39835.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_2883_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3742..5085)
DNA (1344bp) protein (448aa)
transporter n=1 Tax=Afipia birgiae RepID=UPI00030CF35C
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS39833.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
secretion protein HlyD
scnpilot_expt_750_bf_scaffold_2883_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5075..6022)
DNA (948bp) protein (316aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGS8_9BRAD
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:EKS39989.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
RND efflux system, outer membrane lipoprotein, NodT
scnpilot_expt_750_bf_scaffold_2883_6
unknown

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6079..6351
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_2883_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6957..8186
DNA (1230bp) protein (410aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PKE1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39990.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
scnpilot_expt_750_bf_scaffold_2883_8
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8302..9342
DNA (1041bp) protein (347aa)
Cysteine synthase B {ECO:0000313|EMBL:EGP07278.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EGP07278.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" so
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase B n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QN63_9BRAD rbh
scnpilot_expt_750_bf_scaffold_2883_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9436..10176)
DNA (741bp) protein (247aa)
ABC transporter n=1 Tax=Afipia birgiae RepID=UPI0002FDA753 rbh
General L-amino acid transport ATP-binding protein AapP {ECO:0000313|EMBL:EKS39992.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_2883_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10186..11706)
DNA (1521bp) protein (507aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PB39_9BRAD rbh
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EKS39827.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
amino acid ABC transporter permease
Displaying 10 items

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