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scnpilot_expt_750_bf_scaffold_1026

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1026_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..279)
DNA (279bp) protein (93aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC52_9BRAD
Acetylglutamate kinase {ECO:0000313|EMBL:EKS37190.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.
scnpilot_expt_750_bf_scaffold_1026_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(358..738)
DNA (381bp) protein (127aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI00030087F1
Uncharacterized protein {ECO:0000313|EMBL:EKS37189.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1026_3
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(738..1403)
DNA (666bp) protein (222aa)
GTP-binding protein YsxC n=1 Tax=Afipia birgiae RepID=UPI0002E4CAA2 rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia cleve
engB; ribosome biogenesis GTP-binding protein YsxC
scnpilot_expt_750_bf_scaffold_1026_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1471..3309)
DNA (1839bp) protein (613aa)
Membrane protein insertase YidC n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3R1_9BRAD rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
inner membrane protein OxaA
scnpilot_expt_750_bf_scaffold_1026_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3323..3712)
DNA (390bp) protein (130aa)
ribonuclease P n=1 Tax=Afipia birgiae RepID=UPI0002EB0A20
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
ribonuclease P
scnpilot_expt_750_bf_scaffold_1026_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4244..5728
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PC46_9BRAD rbh
histidine kinase
scnpilot_expt_750_bf_scaffold_1026_trna_1
unknown

Not on your lists

5847..5920
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1026_7
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6043..7353)
DNA (1311bp) protein (437aa)
alcohol dehydrogenase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D544E rbh
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:EKF06487.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="
cytochrome c family protein rbh
scnpilot_expt_750_bf_scaffold_1026_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7369..9135)
DNA (1767bp) protein (589aa)
GMC family oxidoreductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035D9A7A rbh
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:EKF41109.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Ni
gluconate 2-dehydrogenase (acceptor) rbh
scnpilot_expt_750_bf_scaffold_1026_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9138..9866)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037F0EAD rbh
Gluconate 2-dehydrogenase subunit 3 {ECO:0000313|EMBL:EEQ93538.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum
hypothetical protein
scnpilot_expt_750_bf_scaffold_1026_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10273..11799
DNA (1527bp) protein (509aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8D7_9BRAD rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EKS37064.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 497
scnpilot_expt_750_bf_scaffold_1026_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11959..13638
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003666DEF rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC47776.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
methyl-accepting chemotaxis sensory transducer
scnpilot_expt_750_bf_scaffold_1026_12
unknown

Not on your lists

comp(13735..13866)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1026_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13953..14657
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6E1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37061.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
conserved exported hypothetical protein
scnpilot_expt_750_bf_scaffold_1026_14
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14765..15241)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG26_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09968.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
YbaK/prolyl-tRNA synthetase associated region
scnpilot_expt_750_bf_scaffold_1026_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15284..15667
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8D1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37059.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1026_16
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15674..16444)
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG24_9BRAD rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EGP09966.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae b
IclR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1026_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16550..17029
DNA (480bp) protein (160aa)
monoamine oxidase n=1 Tax=Afipia birgiae RepID=UPI0003098B18 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37057.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
dehydratase
scnpilot_expt_750_bf_scaffold_1026_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17052..17504
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG22_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09964.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
MaoC-like dehydratase
scnpilot_expt_750_bf_scaffold_1026_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17521..18759
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000305E8C9 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37055.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_expt_750_bf_scaffold_1026_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18832..19011
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P8C6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37054.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
Displaying 21 items

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